AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.md
pyproject.toml
docs/Makefile
docs/authors.rst
docs/conf.py
docs/contributing.rst
docs/history.rst
docs/index.rst
docs/inp_out_build.rst
docs/inp_out_mapping.rst
docs/installation.rst
docs/make.bat
docs/overview.rst
docs/quickstart.rst
docs/readme.rst
docs/tutorial.rst
docs/usage.rst
docs/usage_advanced.rst
docs/pictures/MetaNetMap_overview.png
src/metanetmap/__init__.py
src/metanetmap/build_database.py
src/metanetmap/cli.py
src/metanetmap/mapping.py
src/metanetmap/utils.py
src/metanetmap.egg-info/PKG-INFO
src/metanetmap.egg-info/SOURCES.txt
src/metanetmap.egg-info/dependency_links.txt
src/metanetmap.egg-info/entry_points.txt
src/metanetmap.egg-info/requires.txt
src/metanetmap.egg-info/top_level.txt
src/metanetmap/toys_tests_data/conversion_datatable_toys.tsv
src/metanetmap/toys_tests_data/toys/maf/toys1.tsv
src/metanetmap/toys_tests_data/toys/maf/toys2.tsv
src/metanetmap/toys_tests_data/toys/maf/toys3.tsv
src/metanetmap/toys_tests_data/toys/sbml/toys1.sbml
src/metanetmap/toys_tests_data/toys/sbml/toys2.sbml
src/metanetmap/toys_tests_data/toys/sbml/toys3.xml
tests/building_datatable_test.py
tests/mapping_test.py
tests/partial_methods_test.py
tests/postprocess_test.py
tests/preprocess_test.py
tests/utils_test.py
tests/expected_results/community_mapping_results_2025-10-27_15_51_33.tsv
tests/expected_results/community_mapping_results_partial_match_2025-10-27_15_55_35.tsv
tests/expected_results/t2mapping_results_2025-10-27_15_35_48.tsv
tests/expected_results/t2mapping_results_partial_match_2025-10-27_15_36_16.tsv