LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.py
metamist/__init__.py
metamist/api_client.py
metamist/configuration.py
metamist/exceptions.py
metamist/model_utils.py
metamist/rest.py
metamist.egg-info/PKG-INFO
metamist.egg-info/SOURCES.txt
metamist.egg-info/dependency_links.txt
metamist.egg-info/entry_points.txt
metamist.egg-info/not-zip-safe
metamist.egg-info/requires.txt
metamist.egg-info/top_level.txt
metamist/api/__init__.py
metamist/api/analysis_api.py
metamist/api/analysis_runner_api.py
metamist/api/assay_api.py
metamist/api/billing_api.py
metamist/api/cohort_api.py
metamist/api/enums_api.py
metamist/api/family_api.py
metamist/api/import_api.py
metamist/api/participant_api.py
metamist/api/project_api.py
metamist/api/project_insights_api.py
metamist/api/sample_api.py
metamist/api/seqr_api.py
metamist/api/sequencing_group_api.py
metamist/api/web_api.py
metamist/apis/__init__.py
metamist/audit/__init__.py
metamist/audit/audit_upload_bucket.py
metamist/audit/audithelper.py
metamist/audit/delete_assay_files_from_audit.py
metamist/audit/generic_auditor.py
metamist/graphql/__init__.py
metamist/graphql/schema.graphql
metamist/model/__init__.py
metamist/model/analysis.py
metamist/model/analysis_cost_record.py
metamist/model/analysis_cost_record_batch.py
metamist/model/analysis_cost_record_batch_job.py
metamist/model/analysis_cost_record_category.py
metamist/model/analysis_cost_record_cromwell_subworkflow.py
metamist/model/analysis_cost_record_cromwell_workflow.py
metamist/model/analysis_cost_record_seq_group.py
metamist/model/analysis_cost_record_sku.py
metamist/model/analysis_cost_record_topic.py
metamist/model/analysis_cost_record_total.py
metamist/model/analysis_cost_record_wdl_task.py
metamist/model/analysis_query_model.py
metamist/model/analysis_runner.py
metamist/model/analysis_stats.py
metamist/model/analysis_status.py
metamist/model/analysis_update_model.py
metamist/model/assay.py
metamist/model/assay_query_criteria.py
metamist/model/assay_upsert.py
metamist/model/billing_column.py
metamist/model/billing_cost_budget_record.py
metamist/model/billing_cost_details_record.py
metamist/model/billing_source.py
metamist/model/billing_time_column.py
metamist/model/billing_time_periods.py
metamist/model/billing_total_cost_query_model.py
metamist/model/billing_total_cost_record.py
metamist/model/body_create_cohort_from_criteria.py
metamist/model/body_export_project_participants.py
metamist/model/body_get_latest_complete_analysis_for_type_post.py
metamist/model/body_get_project_insights_details.py
metamist/model/body_get_project_insights_summary.py
metamist/model/body_get_proportionate_map.py
metamist/model/cohort_body.py
metamist/model/cohort_criteria.py
metamist/model/cohort_template.py
metamist/model/error_response.py
metamist/model/export_project_participant_fields.py
metamist/model/export_type.py
metamist/model/extra_participant_importer_handler.py
metamist/model/family.py
metamist/model/family_search_response_data.py
metamist/model/family_simple.py
metamist/model/family_update_model.py
metamist/model/generic_filter_any.py
metamist/model/generic_filter_int.py
metamist/model/generic_filter_str.py
metamist/model/get_samples_criteria.py
metamist/model/http_validation_error.py
metamist/model/meta_search_entity_prefix.py
metamist/model/nested_participant.py
metamist/model/nested_sample.py
metamist/model/nested_sequencing_group.py
metamist/model/new_cohort.py
metamist/model/participant_grid_assay_filter.py
metamist/model/participant_grid_family_filter.py
metamist/model/participant_grid_participant_filter.py
metamist/model/participant_grid_sample_filter.py
metamist/model/participant_grid_sequencing_group_filter.py
metamist/model/participant_search_response_data.py
metamist/model/participant_upsert.py
metamist/model/project.py
metamist/model/project_insights_details.py
metamist/model/project_insights_summary.py
metamist/model/project_member_role.py
metamist/model/project_member_update.py
metamist/model/project_participant_grid_field.py
metamist/model/project_participant_grid_filter.py
metamist/model/project_participant_grid_filter_type.py
metamist/model/project_participant_grid_response.py
metamist/model/project_summary.py
metamist/model/proportional_date_temporal_method.py
metamist/model/query_participant_criteria.py
metamist/model/sample_search_response_data.py
metamist/model/sample_upsert.py
metamist/model/search_response.py
metamist/model/search_response_model.py
metamist/model/search_response_type.py
metamist/model/seqr_dataset_type.py
metamist/model/sequencing_group.py
metamist/model/sequencing_group_meta_update_model.py
metamist/model/sequencing_group_search_response_data.py
metamist/model/sequencing_group_upsert.py
metamist/model/table_error.py
metamist/model/validation_error.py
metamist/model/web_project.py
metamist/models/__init__.py
metamist/parser/__init__.py
metamist/parser/cloudhelper.py
metamist/parser/generic_metadata_parser.py
metamist/parser/generic_parser.py
metamist/parser/sample_file_map_parser.py
test/test_analysis.py
test/test_analysis_output_files.py
test/test_analysis_runner.py
test/test_api_billing.py
test/test_api_utils.py
test/test_assay.py
test/test_audit_log.py
test/test_bq_billing_ar_batch.py
test/test_bq_billing_base.py
test/test_bq_billing_daily.py
test/test_bq_billing_daily_extended.py
test/test_bq_billing_gcp_daily.py
test/test_bq_billing_raw.py
test/test_bq_function_filter.py
test/test_bq_generic_filter.py
test/test_cohort.py
test/test_cohort_builder.py
test/test_comment.py
test/test_external_id.py
test/test_generate_data.py
test/test_generic_auditor.py
test/test_generic_filters.py
test/test_generic_parser.py
test/test_get_participants.py
test/test_graphql.py
test/test_import_individual_metadata.py
test/test_layers_billing.py
test/test_meta_table.py
test/test_metamist.py
test/test_models.py
test/test_mutations.py
test/test_parse_existing_cohort.py
test/test_parse_file_map.py
test/test_parse_generic_metadata.py
test/test_parse_ont_processor.py
test/test_parse_ont_sheet.py
test/test_participant.py
test/test_pedigree.py
test/test_project_groups.py
test/test_project_insights.py
test/test_sample.py
test/test_search.py
test/test_sequencing_groups.py
test/test_update_participant_family.py
test/test_upsert.py
test/test_web.py
test/testbase.py
test/testbqbase.py