Metadata-Version: 2.1
Name: mergesvvcf
Version: 1.0.3
Summary: Merge SV VCF calls. Fork of https://github.com/ljdursi/mergevcf by Jonathan Dursi (Jonathan.Dursi@oicr.on.ca)
Home-page: https://github.com/papaemmelab/mergeSVvcf
Author: Max Levine
Author-email: levinem1@mskcc.org
License: GPL
Keywords: merge sv vcfs
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering
Classifier: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 3
Requires-Dist: pysam (>=0.15.2)
Requires-Dist: Cython (>=0.29.7)
Provides-Extra: dev
Requires-Dist: check-manifest ; extra == 'dev'
Provides-Extra: test
Requires-Dist: coverage ; extra == 'test'

# Merge SV VCFs


This set of routines merges SV VCF files by calls, labeling calls by the callers that
made them in an INFO field, Callers=.   Most of the work goes into normalizing
SV calls, which are treated as paired of breakpoints that are equal if they fall within
a user-specified window.

