LICENSE
README.md
setup.py
src/meditability.egg-info/PKG-INFO
src/meditability.egg-info/SOURCES.txt
src/meditability.egg-info/dependency_links.txt
src/meditability.egg-info/entry_points.txt
src/meditability.egg-info/requires.txt
src/meditability.egg-info/top_level.txt
src/prog/__init__.py
src/prog/arguments.py
src/prog/db_set.py
src/prog/guide_prediction.py
src/prog/list_editors.py
src/prog/mEdit.py
src/prog/medit_lib.py
src/smk/__init__.py
src/smk/config/__init__.py
src/smk/config/aws_download.yaml
src/smk/config/caspedia_ingest.yaml
src/smk/config/cluster.yaml
src/smk/config/guide_prediction_default_template.yaml
src/smk/config/guide_prediction_private_template.yaml
src/smk/config/hgvs_input.yaml
src/smk/config/id_convert.yaml
src/smk/config/medit_cluster.yaml
src/smk/config/medit_database.yaml
src/smk/config/medit_guide_pred.yaml
src/smk/config/preprocessing_configuration.yaml
src/smk/envs/__init__.py
src/smk/envs/backup_medit.yaml
src/smk/envs/bio.yaml
src/smk/envs/casoff.yaml
src/smk/envs/clinvar_pull.yaml
src/smk/envs/gdown.yaml
src/smk/envs/medit.yaml
src/smk/envs/samtools.yaml
src/smk/envs/test_medit.yaml
src/smk/envs/vcf.yaml
src/smk/pipelines/__init__.py
src/smk/pipelines/compression_routine.smk
src/smk/pipelines/filename_standardization.smk
src/smk/pipelines/guide_prediction.smk
src/smk/pipelines/offtarget_prediction.smk
src/smk/pipelines/vcf_processing.smk
src/smk/pipelines/py/__init__.py
src/smk/pipelines/py/annotate.py
src/smk/pipelines/py/aws_pull.py
src/smk/pipelines/py/clinVar_pull.py
src/smk/pipelines/py/dataH.py
src/smk/pipelines/py/featurization.py
src/smk/pipelines/py/fetchGuides.py
src/smk/pipelines/py/find_offtargets.py
src/smk/pipelines/py/gdrive_import.py
src/smk/pipelines/py/genome_seq_search.py
src/smk/pipelines/py/make_tables.py
src/smk/pipelines/py/ncbi_cross_database.py
src/smk/pipelines/py/process_genome.py
src/smk/pipelines/py/scoring.py
src/smk/pipelines/py/validate.py