# MedDLE requirements
funcy==2.0
humanize==4.8.0
jsonschema==4.19.2
openai>=1.69.0
anthropic>=0.20.0
pytest==7.4.3
requests==2.31.0
rich==13.7.0
dataclasses_json>=0.6.4
omegaconf>=2.3.0
loguru==0.7.2
shutup>=0.2.0
coolname>=2.2.0
igraph>=0.11.3
genson>=1.2.0

# agent requirements (packages that the agent might need)
lightgbm
matplotlib
seaborn
gensim
scikit-learn
opencv-python
scipy
biopython
imbalanced-learn
h5py
numba
arrow
markovify
imgaug
scikit-optimize
plotly
hyperopt
bayesian-optimization
imagecodecs
hmmlearn
bayespy==0.5.1
sklearn-pandas
tensorpack
sentencepiece
librosa
ipykernel
ipython
nbformat
kornia
Pillow
pyparsing
pytz
PyYAML
fastai
gym
optuna
transformers
datasets==2.1.0
torchmetrics
pytorch-lightning
sympy
timm
torchinfo
pdf2image
PyPDF
pyocr
pyarrow
xlrd
backoff
streamlit==1.40.2
python-dotenv
openpyxl

langchain
langchain-openai
langchain-community
beautifulsoup4
chromadb
SimpleITK
nibabel

html2text
tiktoken
autogluon

# MONAI requirements
monai[all]==1.4.0

# additional medical task requirements
pydicom
lifelines