README.md
pyproject.toml
medcat/__init__.py
medcat/cat.py
medcat/py.typed
medcat/trainer.py
medcat/vocab.py
medcat.egg-info/PKG-INFO
medcat.egg-info/SOURCES.txt
medcat.egg-info/dependency_links.txt
medcat.egg-info/requires.txt
medcat.egg-info/top_level.txt
medcat/cdb/__init__.py
medcat/cdb/cdb.py
medcat/cdb/concepts.py
medcat/components/__init__.py
medcat/components/types.py
medcat/components/addons/__init__.py
medcat/components/addons/addons.py
medcat/components/addons/meta_cat/__init__.py
medcat/components/addons/meta_cat/data_utils.py
medcat/components/addons/meta_cat/meta_cat.py
medcat/components/addons/meta_cat/ml_utils.py
medcat/components/addons/meta_cat/models.py
medcat/components/addons/meta_cat/mctokenizers/__init__.py
medcat/components/addons/meta_cat/mctokenizers/bert_tokenizer.py
medcat/components/addons/meta_cat/mctokenizers/bpe_tokenizer.py
medcat/components/addons/meta_cat/mctokenizers/tokenizers.py
medcat/components/addons/relation_extraction/__init__.py
medcat/components/addons/relation_extraction/base_component.py
medcat/components/addons/relation_extraction/config.py
medcat/components/addons/relation_extraction/ml_utils.py
medcat/components/addons/relation_extraction/models.py
medcat/components/addons/relation_extraction/pad_seq.py
medcat/components/addons/relation_extraction/rel_cat.py
medcat/components/addons/relation_extraction/rel_dataset.py
medcat/components/addons/relation_extraction/tokenizer.py
medcat/components/addons/relation_extraction/bert/__init__.py
medcat/components/addons/relation_extraction/bert/config.py
medcat/components/addons/relation_extraction/bert/model.py
medcat/components/addons/relation_extraction/bert/tokenizer.py
medcat/components/addons/relation_extraction/llama/__init__.py
medcat/components/addons/relation_extraction/llama/config.py
medcat/components/addons/relation_extraction/llama/model.py
medcat/components/addons/relation_extraction/llama/tokenizer.py
medcat/components/addons/relation_extraction/modernbert/__init__.py
medcat/components/addons/relation_extraction/modernbert/config.py
medcat/components/addons/relation_extraction/modernbert/model.py
medcat/components/addons/relation_extraction/modernbert/tokenizer.py
medcat/components/linking/__init__.py
medcat/components/linking/context_based_linker.py
medcat/components/linking/no_action_linker.py
medcat/components/linking/two_step_context_based_linker.py
medcat/components/linking/vector_context_model.py
medcat/components/ner/__init__.py
medcat/components/ner/dict_based_ner.py
medcat/components/ner/vocab_based_annotator.py
medcat/components/ner/vocab_based_ner.py
medcat/components/ner/trf/__init__.py
medcat/components/ner/trf/deid.py
medcat/components/ner/trf/helpers.py
medcat/components/ner/trf/model.py
medcat/components/ner/trf/tokenizer.py
medcat/components/ner/trf/transformers_ner.py
medcat/components/normalizing/__init__.py
medcat/components/normalizing/normalizer.py
medcat/components/tagging/__init__.py
medcat/components/tagging/tagger.py
medcat/config/__init__.py
medcat/config/config.py
medcat/config/config_meta_cat.py
medcat/config/config_rel_cat.py
medcat/config/config_transformers_ner.py
medcat/data/__init__.py
medcat/data/entities.py
medcat/data/mctexport.py
medcat/data/model_card.py
medcat/model_creation/__init__.py
medcat/model_creation/cdb_maker.py
medcat/model_creation/preprocess_snomed.py
medcat/model_creation/preprocess_umls.py
medcat/pipeline/__init__.py
medcat/pipeline/pipeline.py
medcat/preprocessors/__init__.py
medcat/preprocessors/cleaners.py
medcat/stats/__init__.py
medcat/stats/kfold.py
medcat/stats/stats.py
medcat/storage/__init__.py
medcat/storage/jsonserialiser.py
medcat/storage/schema.py
medcat/storage/serialisables.py
medcat/storage/serialisers.py
medcat/storage/zip_utils.py
medcat/tokenizing/__init__.py
medcat/tokenizing/tokenizers.py
medcat/tokenizing/tokens.py
medcat/tokenizing/regex_impl/__init__.py
medcat/tokenizing/regex_impl/tokenizer.py
medcat/tokenizing/spacy_impl/__init__.py
medcat/tokenizing/spacy_impl/tokenizers.py
medcat/tokenizing/spacy_impl/tokens.py
medcat/tokenizing/spacy_impl/utils.py
medcat/utils/__init__.py
medcat/utils/cdb_state.py
medcat/utils/config_utils.py
medcat/utils/data_utils.py
medcat/utils/defaults.py
medcat/utils/envsnapshot.py
medcat/utils/fileutils.py
medcat/utils/filters.py
medcat/utils/hasher.py
medcat/utils/import_utils.py
medcat/utils/iterutils.py
medcat/utils/matutils.py
medcat/utils/postprocessing.py
medcat/utils/registry.py
medcat/utils/usage_monitoring.py
medcat/utils/vocab_utils.py
medcat/utils/legacy/__init__.py
medcat/utils/legacy/conversion_all.py
medcat/utils/legacy/convert_cdb.py
medcat/utils/legacy/convert_config.py
medcat/utils/legacy/convert_deid.py
medcat/utils/legacy/convert_meta_cat.py
medcat/utils/legacy/convert_rel_cat.py
medcat/utils/legacy/convert_vocab.py
medcat/utils/legacy/helpers.py
medcat/utils/legacy/identifier.py
medcat/utils/legacy/legacy_converter.py
medcat/utils/legacy/v2_beta.py
medcat/utils/ner/__init__.py
medcat/utils/ner/data_collator.py
medcat/utils/ner/metrics.py
medcat/utils/ner/transformers_ner.py
medcat/utils/regression/__init__.py
medcat/utils/regression/checking.py
medcat/utils/regression/regression_checker.py
medcat/utils/regression/results.py
medcat/utils/regression/targeting.py
medcat/utils/regression/utils.py
tests/test_cat.py
tests/test_trainer.py
tests/test_vocab.py