LICENSE.md
README.md
pyproject.toml
./mbo_utilities/__init__.py
./mbo_utilities/__main__.py
./mbo_utilities/_benchmark.py
./mbo_utilities/_installation.py
./mbo_utilities/_parsing.py
./mbo_utilities/_protocols.py
./mbo_utilities/_writers.py
./mbo_utilities/array_types.py
./mbo_utilities/cli.py
./mbo_utilities/file_io.py
./mbo_utilities/install_checker.py
./mbo_utilities/lazy_array.py
./mbo_utilities/log.py
./mbo_utilities/metadata.py
./mbo_utilities/metrics.py
./mbo_utilities/phasecorr.py
./mbo_utilities/plot_util.py
./mbo_utilities/preferences.py
./mbo_utilities/reader.py
./mbo_utilities/transfer.py
./mbo_utilities/util.py
./mbo_utilities/widgets.py
./mbo_utilities/writer.py
./mbo_utilities/analysis/__init__.py
./mbo_utilities/analysis/_scanphase_dialog.py
./mbo_utilities/analysis/cellpose.py
./mbo_utilities/analysis/scanphase.py
./mbo_utilities/arrays/__init__.py
./mbo_utilities/arrays/_base.py
./mbo_utilities/arrays/_registration.py
./mbo_utilities/arrays/bin.py
./mbo_utilities/arrays/h5.py
./mbo_utilities/arrays/isoview.py
./mbo_utilities/arrays/numpy.py
./mbo_utilities/arrays/nwb.py
./mbo_utilities/arrays/suite2p.py
./mbo_utilities/arrays/tiff.py
./mbo_utilities/arrays/zarr.py
./mbo_utilities/formats/__init__.py
./mbo_utilities/formats/base.py
./mbo_utilities/formats/binary.py
./mbo_utilities/formats/descriptor.py
./mbo_utilities/formats/hdf5.py
./mbo_utilities/formats/numpy.py
./mbo_utilities/formats/registry.py
./mbo_utilities/formats/suite2p.py
./mbo_utilities/formats/tiff.py
./mbo_utilities/formats/zarr.py
./mbo_utilities/graphics/__init__.py
./mbo_utilities/graphics/_availability.py
./mbo_utilities/graphics/_file_dialog.py
./mbo_utilities/graphics/_imgui.py
./mbo_utilities/graphics/_protocols.py
./mbo_utilities/graphics/_wgpu.py
./mbo_utilities/graphics/_widgets.py
./mbo_utilities/graphics/demo_automation.py
./mbo_utilities/graphics/diagnostics_widget.py
./mbo_utilities/graphics/grid_search_viewer.py
./mbo_utilities/graphics/gui_logger.py
./mbo_utilities/graphics/imgui.py
./mbo_utilities/graphics/pipeline_widgets.py
./mbo_utilities/graphics/progress_bar.py
./mbo_utilities/graphics/run_gui.py
./mbo_utilities/graphics/simple_selector.py
./mbo_utilities/graphics/suite2p_results.py
./mbo_utilities/graphics/upgrade_manager.py
./mbo_utilities/graphics/widgets/__init__.py
./mbo_utilities/graphics/widgets/_base.py
./mbo_utilities/graphics/widgets/raster_scan.py
./mbo_utilities/graphics/widgets/window_functions.py
./mbo_utilities/graphics/widgets/pipelines/__init__.py
./mbo_utilities/graphics/widgets/pipelines/_base.py
./mbo_utilities/graphics/widgets/pipelines/suite2p.py
./pollen/__init__.py
./pollen/pollen_calibration_mbo.py
mbo_utilities/__init__.py
mbo_utilities/__main__.py
mbo_utilities/_benchmark.py
mbo_utilities/_installation.py
mbo_utilities/_parsing.py
mbo_utilities/_protocols.py
mbo_utilities/_writers.py
mbo_utilities/array_types.py
mbo_utilities/cli.py
mbo_utilities/file_io.py
mbo_utilities/install_checker.py
mbo_utilities/lazy_array.py
mbo_utilities/log.py
mbo_utilities/metadata.py
mbo_utilities/metrics.py
mbo_utilities/phasecorr.py
mbo_utilities/plot_util.py
mbo_utilities/preferences.py
mbo_utilities/reader.py
mbo_utilities/transfer.py
mbo_utilities/util.py
mbo_utilities/widgets.py
mbo_utilities/writer.py
mbo_utilities.egg-info/PKG-INFO
mbo_utilities.egg-info/SOURCES.txt
mbo_utilities.egg-info/dependency_links.txt
mbo_utilities.egg-info/entry_points.txt
mbo_utilities.egg-info/requires.txt
mbo_utilities.egg-info/top_level.txt
mbo_utilities/analysis/__init__.py
mbo_utilities/analysis/_scanphase_dialog.py
mbo_utilities/analysis/cellpose.py
mbo_utilities/analysis/scanphase.py
mbo_utilities/arrays/__init__.py
mbo_utilities/arrays/_base.py
mbo_utilities/arrays/_registration.py
mbo_utilities/arrays/bin.py
mbo_utilities/arrays/h5.py
mbo_utilities/arrays/isoview.py
mbo_utilities/arrays/numpy.py
mbo_utilities/arrays/nwb.py
mbo_utilities/arrays/suite2p.py
mbo_utilities/arrays/tiff.py
mbo_utilities/arrays/zarr.py
mbo_utilities/assets/app_settings/icon.png
mbo_utilities/assets/fonts/Akronim-Regular.ttf
mbo_utilities/assets/fonts/DroidSans.ttf
mbo_utilities/assets/fonts/Font_Awesome_6_Free-Solid-900.otf
mbo_utilities/assets/fonts/Inconsolata-Medium.ttf
mbo_utilities/assets/fonts/SourceCodePro-Regular.ttf
mbo_utilities/assets/fonts/fontawesome-webfont.ttf
mbo_utilities/assets/fonts/JetBrainsMono/JetBrainsMonoNerdFont-Bold.ttf
mbo_utilities/assets/fonts/JetBrainsMono/OFL.txt
mbo_utilities/assets/fonts/JetBrainsMono/README.md
mbo_utilities/assets/fonts/Roboto/LICENSE.txt
mbo_utilities/assets/fonts/Roboto/Roboto-Bold.ttf
mbo_utilities/assets/fonts/Roboto/Roboto-BoldItalic.ttf
mbo_utilities/assets/fonts/Roboto/Roboto-Regular.ttf
mbo_utilities/assets/fonts/Roboto/Roboto-RegularItalic.ttf
mbo_utilities/assets/static/icon_caiman_python.svg
mbo_utilities/assets/static/icon_mbo_home.png
mbo_utilities/assets/static/icon_mbo_home.svg
mbo_utilities/assets/static/icon_suite2p.svg
mbo_utilities/assets/static/lbm_mat_favicon.svg
mbo_utilities/assets/static/logo_utilities.png
mbo_utilities/assets/static/mbo.png
mbo_utilities/assets/static/mbo_home_icon.png
mbo_utilities/assets/static/mbo_hub.svg
mbo_utilities/assets/static/mbo_hub_saph.svg
mbo_utilities/assets/static/mbo_icon.ico
mbo_utilities/assets/static/mbo_icon_dark.ico
mbo_utilities/assets/static/utilities.png
mbo_utilities/formats/__init__.py
mbo_utilities/formats/base.py
mbo_utilities/formats/binary.py
mbo_utilities/formats/descriptor.py
mbo_utilities/formats/hdf5.py
mbo_utilities/formats/numpy.py
mbo_utilities/formats/registry.py
mbo_utilities/formats/suite2p.py
mbo_utilities/formats/tiff.py
mbo_utilities/formats/zarr.py
mbo_utilities/graphics/__init__.py
mbo_utilities/graphics/_availability.py
mbo_utilities/graphics/_file_dialog.py
mbo_utilities/graphics/_imgui.py
mbo_utilities/graphics/_protocols.py
mbo_utilities/graphics/_wgpu.py
mbo_utilities/graphics/_widgets.py
mbo_utilities/graphics/demo_automation.py
mbo_utilities/graphics/diagnostics_widget.py
mbo_utilities/graphics/grid_search_viewer.py
mbo_utilities/graphics/gui_logger.py
mbo_utilities/graphics/imgui.py
mbo_utilities/graphics/pipeline_widgets.py
mbo_utilities/graphics/progress_bar.py
mbo_utilities/graphics/run_gui.py
mbo_utilities/graphics/simple_selector.py
mbo_utilities/graphics/suite2p_results.py
mbo_utilities/graphics/upgrade_manager.py
mbo_utilities/graphics/widgets/__init__.py
mbo_utilities/graphics/widgets/_base.py
mbo_utilities/graphics/widgets/raster_scan.py
mbo_utilities/graphics/widgets/window_functions.py
mbo_utilities/graphics/widgets/pipelines/__init__.py
mbo_utilities/graphics/widgets/pipelines/_base.py
mbo_utilities/graphics/widgets/pipelines/suite2p.py
pollen/__init__.py
pollen/pollen_calibration_mbo.py
tests/test_arrays.py
tests/test_metadata.py
tests/test_roundtrip.py
tests/test_to_video.py