MANIFEST.in
README.md
setup.py
bin/fixChadoModel.py
docs/make
docs/html/.buildinfo
docs/html/cache.html
docs/html/dataload.html
docs/html/diagrams.html
docs/html/genindex.html
docs/html/index.html
docs/html/index_search.html
docs/html/insert_organism.html
docs/html/installation.html
docs/html/jbrowse.html
docs/html/load_blast.html
docs/html/load_coexpression.html
docs/html/load_fasta.html
docs/html/load_feature_annotation.html
docs/html/load_gff.html
docs/html/load_interproscan.html
docs/html/load_ontologies.html
docs/html/load_orthomcl.html
docs/html/load_publication.html
docs/html/load_rnaseq.html
docs/html/load_taxonomy.html
docs/html/load_vcf.html
docs/html/models.html
docs/html/objects.inv
docs/html/search.html
docs/html/searchindex.js
docs/html/visualization.html
docs/html/webserver.html
docs/html/.doctrees/cache.doctree
docs/html/.doctrees/dataload.doctree
docs/html/.doctrees/diagrams.doctree
docs/html/.doctrees/environment.pickle
docs/html/.doctrees/index.doctree
docs/html/.doctrees/index_search.doctree
docs/html/.doctrees/insert_organism.doctree
docs/html/.doctrees/installation.doctree
docs/html/.doctrees/jbrowse.doctree
docs/html/.doctrees/load_blast.doctree
docs/html/.doctrees/load_coexpression.doctree
docs/html/.doctrees/load_fasta.doctree
docs/html/.doctrees/load_feature_annotation.doctree
docs/html/.doctrees/load_gff.doctree
docs/html/.doctrees/load_interproscan.doctree
docs/html/.doctrees/load_ontologies.doctree
docs/html/.doctrees/load_orthomcl.doctree
docs/html/.doctrees/load_publication.doctree
docs/html/.doctrees/load_rnaseq.doctree
docs/html/.doctrees/load_taxonomy.doctree
docs/html/.doctrees/load_vcf.doctree
docs/html/.doctrees/models.doctree
docs/html/.doctrees/visualization.doctree
docs/html/.doctrees/webserver.doctree
docs/html/_images/analysis_feature.png
docs/html/_images/feature.png
docs/html/_images/ontology.png
docs/html/_images/publication.png
docs/html/_images/sequence.png
docs/html/_images/similarity.png
docs/html/_images/taxonomy.png
docs/html/_sources/cache.rst.txt
docs/html/_sources/dataload.rst.txt
docs/html/_sources/diagrams.rst.txt
docs/html/_sources/index.rst.txt
docs/html/_sources/index_search.rst.txt
docs/html/_sources/insert_organism.rst.txt
docs/html/_sources/installation.rst.txt
docs/html/_sources/jbrowse.rst.txt
docs/html/_sources/load_blast.rst.txt
docs/html/_sources/load_coexpression.rst.txt
docs/html/_sources/load_fasta.rst.txt
docs/html/_sources/load_feature_annotation.rst.txt
docs/html/_sources/load_gff.rst.txt
docs/html/_sources/load_interproscan.rst.txt
docs/html/_sources/load_ontologies.rst.txt
docs/html/_sources/load_orthomcl.rst.txt
docs/html/_sources/load_publication.rst.txt
docs/html/_sources/load_rnaseq.rst.txt
docs/html/_sources/load_taxonomy.rst.txt
docs/html/_sources/load_vcf.rst.txt
docs/html/_sources/models.rst.txt
docs/html/_sources/visualization.rst.txt
docs/html/_sources/webserver.rst.txt
docs/html/_static/analysis_feature.png
docs/html/_static/basic.css
docs/html/_static/doctools.js
docs/html/_static/documentation_options.js
docs/html/_static/feature.png
docs/html/_static/file.png
docs/html/_static/jquery-3.2.1.js
docs/html/_static/jquery-3.4.1.js
docs/html/_static/jquery.js
docs/html/_static/language_data.js
docs/html/_static/minus.png
docs/html/_static/ontology.png
docs/html/_static/plus.png
docs/html/_static/publication.png
docs/html/_static/pygments.css
docs/html/_static/searchtools.js
docs/html/_static/sequence.png
docs/html/_static/similarity.png
docs/html/_static/taxonomy.png
docs/html/_static/underscore-1.3.1.js
docs/html/_static/underscore.js
docs/html/_static/css/badge_only.css
docs/html/_static/css/theme.css
docs/html/_static/fonts/Inconsolata-Bold.ttf
docs/html/_static/fonts/Inconsolata-Regular.ttf
docs/html/_static/fonts/Inconsolata.ttf
docs/html/_static/fonts/Lato-Bold.ttf
docs/html/_static/fonts/Lato-Regular.ttf
docs/html/_static/fonts/RobotoSlab-Bold.ttf
docs/html/_static/fonts/RobotoSlab-Regular.ttf
docs/html/_static/fonts/fontawesome-webfont.eot
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docs/html/_static/fonts/fontawesome-webfont.woff
docs/html/_static/fonts/fontawesome-webfont.woff2
docs/html/_static/fonts/Lato/lato-bold.eot
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docs/html/_static/fonts/Lato/lato-bold.woff2
docs/html/_static/fonts/Lato/lato-bolditalic.eot
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docs/html/_static/fonts/Lato/lato-regular.woff
docs/html/_static/fonts/Lato/lato-regular.woff2
docs/html/_static/fonts/RobotoSlab/roboto-slab-v7-bold.eot
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docs/html/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff2
docs/html/_static/js/modernizr.min.js
docs/html/_static/js/theme.js
docs/source/cache.rst
docs/source/conf.py
docs/source/dataload.rst
docs/source/diagrams.rst
docs/source/index.rst
docs/source/index_search.rst
docs/source/insert_organism.rst
docs/source/installation.rst
docs/source/jbrowse.rst
docs/source/load_blast.rst
docs/source/load_coexpression.rst
docs/source/load_fasta.rst
docs/source/load_feature_annotation.rst
docs/source/load_gff.rst
docs/source/load_interproscan.rst
docs/source/load_ontologies.rst
docs/source/load_orthomcl.rst
docs/source/load_publication.rst
docs/source/load_rnaseq.rst
docs/source/load_taxonomy.rst
docs/source/models.rst
docs/source/visualization.rst
docs/source/webserver.rst
docs/source/_static/analysis_feature.png
docs/source/_static/feature.png
docs/source/_static/ontology.png
docs/source/_static/publication.png
docs/source/_static/sequence.png
docs/source/_static/similarity.png
docs/source/_static/taxonomy.png
machado/__init__.py
machado/apps.py
machado/decorators.py
machado/forms.py
machado/models.py
machado/search_indexes.py
machado/settings.py
machado/urls.py
machado.egg-info/PKG-INFO
machado.egg-info/SOURCES.txt
machado.egg-info/dependency_links.txt
machado.egg-info/not-zip-safe
machado.egg-info/requires.txt
machado.egg-info/top_level.txt
machado/api/__init__.py
machado/api/serializers.py
machado/api/urls.py
machado/api/views.py
machado/loaders/__init__.py
machado/loaders/analysis.py
machado/loaders/assay.py
machado/loaders/biomaterial.py
machado/loaders/common.py
machado/loaders/exceptions.py
machado/loaders/feature.py
machado/loaders/ontology.py
machado/loaders/organism.py
machado/loaders/phylotree.py
machado/loaders/project.py
machado/loaders/publication.py
machado/loaders/sequence.py
machado/loaders/similarity.py
machado/loaders/treatment.py
machado/management/__init__.py
machado/management/commands/__init__.py
machado/management/commands/insert_organism.py
machado/management/commands/load_coexpression_clusters.py
machado/management/commands/load_coexpression_pairs.py
machado/management/commands/load_fasta.py
machado/management/commands/load_feature_annotation.py
machado/management/commands/load_feature_dbxrefs.py
machado/management/commands/load_feature_publication.py
machado/management/commands/load_feature_sequence.py
machado/management/commands/load_gene_ontology.py
machado/management/commands/load_gff.py
machado/management/commands/load_organism.py
machado/management/commands/load_organism_publication.py
machado/management/commands/load_orthomcl.py
machado/management/commands/load_phylotree.py
machado/management/commands/load_publication.py
machado/management/commands/load_relations_ontology.py
machado/management/commands/load_rnaseq_data.py
machado/management/commands/load_rnaseq_info.py
machado/management/commands/load_sequence_ontology.py
machado/management/commands/load_similarity.py
machado/management/commands/load_similarity_matches.py
machado/management/commands/remove_analysis.py
machado/management/commands/remove_feature_annotation.py
machado/management/commands/remove_file.py
machado/management/commands/remove_ontology.py
machado/management/commands/remove_organism.py
machado/management/commands/remove_organisms.py
machado/management/commands/remove_phylotree.py
machado/management/commands/remove_publication.py
machado/management/commands/remove_relationship.py
machado/migrations/0001_initial.py
machado/migrations/0002_add_index.py
machado/migrations/0003_add_multispecies.py
machado/migrations/__init__.py
machado/schemas/1.31/cv.diff.sql
machado/schemas/1.31/default_schema.sql
machado/static/feature.js
machado/static/main.js
machado/static/screenshot.png
machado/templates/base.html
machado/templates/congrats.html
machado/templates/data-numbers.html
machado/templates/error.html
machado/templates/feature.html
machado/templates/index.html
machado/templates/search_facet.html
machado/templates/search_form.html
machado/templates/search_result.html
machado/templates/search_result.out
machado/templatetags/__init__.py
machado/templatetags/machado_extras.py
machado/tests/__init__.py
machado/tests/settings.py
machado/tests/test_loaders_analysis.py
machado/tests/test_loaders_assay.py
machado/tests/test_loaders_biomaterial.py
machado/tests/test_loaders_coexpression.py
machado/tests/test_loaders_common.py
machado/tests/test_loaders_feature.py
machado/tests/test_loaders_ontology.py
machado/tests/test_loaders_organism.py
machado/tests/test_loaders_orthology.py
machado/tests/test_loaders_phylotree.py
machado/tests/test_loaders_project.py
machado/tests/test_loaders_publication.py
machado/tests/test_loaders_sequence.py
machado/tests/test_loaders_similarity.py
machado/tests/test_loaders_treatment.py
machado/tests/test_models.py
machado/tests/test_templatetags.py
machado/tests/test_views_common.py
machado/tests/test_views_feature.py
machado/tests/data/so_fake.obo
machado/views/__init__.py
machado/views/common.py
machado/views/feature.py
machado/views/search.py