LICENSE
MANIFEST.in
README.md
requirements.txt
setup.cfg
setup.py
loqusdb/__init__.py
loqusdb/__main__.py
loqusdb/log.py
loqusdb.egg-info/PKG-INFO
loqusdb.egg-info/SOURCES.txt
loqusdb.egg-info/dependency_links.txt
loqusdb.egg-info/entry_points.txt
loqusdb.egg-info/requires.txt
loqusdb.egg-info/top_level.txt
loqusdb/commands/__init__.py
loqusdb/commands/cli.py
loqusdb/commands/delete.py
loqusdb/commands/export.py
loqusdb/commands/load.py
loqusdb/commands/wipe.py
loqusdb/exceptions/__init__.py
loqusdb/exceptions/case_exceptions.py
loqusdb/plugins/__init__.py
loqusdb/plugins/base.py
loqusdb/plugins/case.py
loqusdb/plugins/variant.py
loqusdb/plugins/mongo/__init__.py
loqusdb/plugins/mongo/adapter.py
loqusdb/plugins/mongo/case.py
loqusdb/plugins/mongo/variant.py
loqusdb/plugins/sql/__init__.py
loqusdb/utils/__init__.py
loqusdb/utils/case.py
loqusdb/utils/delete.py
loqusdb/utils/load.py
loqusdb/vcf_tools/__init__.py
loqusdb/vcf_tools/variant.py
loqusdb/vcf_tools/vcf.py
tests/conftest.py
tests/fixtures/funny_trio.ped
tests/fixtures/recessive_trio.ped
tests/fixtures/test.vcf
tests/fixtures/test.vcf.gz
tests/functional/test_cli.py
tests/plugins/mongo/test_case_operations.py
tests/plugins/mongo/test_connect.py
tests/plugins/mongo/test_flask_extension.py
tests/plugins/mongo/test_variant_operations.py
tests/utils/test_delete.py
tests/utils/test_delete_family.py
tests/utils/test_delete_variant.py
tests/utils/test_get_family.py
tests/utils/test_load_database.py
tests/utils/test_load_family.py
tests/utils/test_load_variants.py
tests/vcf_tools/test_check_par.py
tests/vcf_tools/test_format_variant.py
tests/vcf_tools/test_vcf.py