Metadata-Version: 2.1
Name: looper
Version: 1.6.0a1
Summary: A pipeline submission engine that parses sample inputs and submits pipelines for each sample.
Home-page: https://github.com/pepkit/looper
Author: Nathan Sheffield, Vince Reuter, Michal Stolarczyk, Johanna Klughammer, Andre Rendeiro
License: BSD2
Keywords: bioinformatics,sequencing,ngs
Classifier: Development Status :: 4 - Beta
Classifier: License :: OSI Approved :: BSD License
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Description-Content-Type: text/markdown
License-File: LICENSE.txt
Requires-Dist: colorama>=0.3.9
Requires-Dist: divvy>=0.5.0
Requires-Dist: eido>=0.2.1
Requires-Dist: jinja2
Requires-Dist: logmuse>=0.2.0
Requires-Dist: pandas>=2.0.2
Requires-Dist: pephubclient>=0.1.2
Requires-Dist: peppy>=0.40.0.a4
Requires-Dist: pipestat>=v0.6.0a9
Requires-Dist: pyyaml>=3.12
Requires-Dist: rich>=9.10.0
Requires-Dist: ubiquerg>=0.5.2
Requires-Dist: yacman>=0.9.2

# <img src="docs/img/looper_logo.svg" alt="looper logo" height="70">

![Run pytests](https://github.com/pepkit/looper/workflows/Run%20pytests/badge.svg)
[![PEP compatible](http://pepkit.github.io/img/PEP-compatible-green.svg)](http://pepkit.github.io)
[![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)


`Looper` is a pipeline submission engine. The typical use case is to run a bioinformatics pipeline across many different input samples. Instructions are in the [documentation](http://looper.databio.org/).
