.gitignore
LICENSE
README.md
longhap.py
longhap.yaml
pyproject.toml
.github/workflows/publish.yml
benchmarking/README.md
benchmarking/Snakefile
benchmarking/benchmark_longhap.ipynb
benchmarking/config/config.yaml
benchmarking/envs/hapcut2.yaml
benchmarking/envs/longphase.yaml
benchmarking/envs/methphaser.yaml
benchmarking/envs/pbmm2.yaml
benchmarking/envs/samtools.yaml
benchmarking/envs/sniffles.yaml
benchmarking/envs/whatshap.yaml
benchmarking/profiles/config.yaml
figures/performance_ont.png
figures/performance_pacbio.png
figures/performance_ulont.png
longhap.egg-info/PKG-INFO
longhap.egg-info/SOURCES.txt
longhap.egg-info/dependency_links.txt
longhap.egg-info/entry_points.txt
longhap.egg-info/requires.txt
longhap.egg-info/top_level.txt