Metadata-Version: 2.1
Name: little-bio-parser
Version: 0.8
Summary: A template project with packages
Home-page: https://github.com/simomarsili/little-bio-parser
Author: Simone Marsili
Author-email: simo.marsili@gmail.com
License: BSD 3-Clause
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: License :: OSI Approved :: BSD License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Requires-Dist: gopen (>=0.6)
Provides-Extra: test
Requires-Dist: pytest ; extra == 'test'

=================
little-bio-parser
=================
A minimalistic parser for sequence alignments
(fasta or stockholm formats).

The parser returns an iterator over the alignment records as
(identifier, sequence) tuples.

Usage example::

  >>> import lilbio
  >>> parsed_records = lilbio.parse('alignment.fa', 'fasta')

Built over modified low-level parsers from Biopython
(SimpleFastaParser function and StockholmIterator class).


Changes
=======
0.8 (2019-05-27)
----------------
- Python3 only (>= 3.4)



