numpy>=1.22.0
biopython>=1.76
cigar>=0.1.3
parasail>=1.2.4
intervaltree>=3.1.0
interlap>=0.2.6
networkx>=3.3
pyfaidx>=0.5.8
pysam>=0.19.1
gffutils>=0.10.1
ujson>=3.2.0
pytest>=7.0.0
