# imports below should not be moved to the top of this file,
# otherwise this would create circular imports
# from ._atom3d_ppi_transforms import (
#     Atom3DPPIToSequence,
#     Atom3DPPIToSequenceAndContactMap,
#     PairedSequenceToTokens,
# )
from ._auto_tokenizer_transform import AutoTokenizerTransform
from ._binarize import BinarizeTransform
from ._convert_seqs import (
    convert_aa_to_nt,
    convert_aa_to_selfies,
    convert_aa_to_smiles,
    convert_nt_to_aa,
    convert_nt_to_selfies,
    convert_selfies_to_aa,
    convert_selfies_to_nt,
    convert_selfies_to_smiles,
    convert_smiles_to_aa,
    convert_smiles_to_selfies,
    replace_target_symbol,
    replace_unknown_symbols,
)
from ._lambda import Lambda
from ._structure_featurizer import StructureFeaturizer
from ._tokenizer_transform import TokenizerTransform
from ._transform import Transform
from ._utils import (
    invert_residue_to_codon_mapping,
    json_load,
    random_boolean_choice,
    sample_list_with_probs,
    uniform_sample,
)

__all__ = [
    "AutoTokenizerTransform",
    "BinarizeTransform",
    "convert_aa_to_nt",
    "convert_aa_to_selfies",
    "convert_aa_to_smiles",
    "convert_nt_to_aa",
    "convert_nt_to_selfies",
    "convert_selfies_to_aa",
    "convert_selfies_to_nt",
    "convert_selfies_to_smiles",
    "convert_smiles_to_aa",
    "convert_smiles_to_selfies",
    "replace_target_symbol",
    "replace_unknown_symbols",
    "Lambda",
    "StructureFeaturizer",
    "TokenizerTransform",
    "Transform",
    "invert_residue_to_codon_mapping",
    "json_load",
    "random_boolean_choice",
    "sample_list_with_probs",
    "uniform_sample",
]
