Metadata-Version: 2.1
Name: landmarker
Version: 0.3.2
Summary: A PyTorch-based toolkit for (anatomical) landmark detection in images.
Author-Email: Jef Jonkers <jef.jonkers@ugent.be>
License: MIT
Requires-Python: <3.12,>=3.10
Requires-Dist: opencv-python-headless>=4.8.1.78
Requires-Dist: monai>=1.3.0
Requires-Dist: torch>=2.0.0
Requires-Dist: torchvision>=0.15.0
Requires-Dist: tqdm>=4.66.1
Requires-Dist: numpy>=1.24.4
Requires-Dist: pandas>=2.0.3
Requires-Dist: opendatasets>=0.1.22
Requires-Dist: rarfile>=4.1
Requires-Dist: scipy>=1.9.3
Requires-Dist: pydicom>=2.4.3
Requires-Dist: matplotlib>=3.7.4
Requires-Dist: seaborn>=0.13.0
Requires-Dist: scikit-image>=0.21.0
Description-Content-Type: text/markdown

<p align="center">
    <a href="https://predict-idlab.github.io/landmarker">
        <img alt="landmarker" src="https://raw.githubusercontent.com/predict-idlab/landmarker/main/docs/_static/images/logo.svg" width="66%">
    </a>
</p>

[![PyPI Latest Release](https://img.shields.io/pypi/v/landmarker.svg)](https://pypi.org/project/landmarker/)
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Landmarker is a [PyTorch](https://pytorch.org/)-based toolkit for (anatomical) landmark localization in 2D/3D images. It is designed to be easy to use and to provide a flexible framework for state-of-the-art landmark localization algorithms for small and large datasets. Landmarker was developed for landmark detection in medical images. However, it can be used for any type of landmark localization problem.

## 🛠️ Installation

|                                                      | command                               |
| :--------------------------------------------------- | :------------------------------------ |
| [**pip**](https://pypi.org/project/landmarker)          | `pip install landmarker`                  |
<!-- | [**conda**](https://anaconda.org/conda-forge/landmarker) | `conda install -c conda-forge landmarker` | -->

## 🚀 Getting Started
Technical documentation is available at [documentation](https://predict-idlab.github.io/landmarker/).

Examples and tutorials are available at [examples](https://predict-idlab.github.io/landmarker/examples/index.html)

## ✨ Features
- **Modular**: Landmarker is designed to be modular. Almost all components can be used independently.
- **Flexible**: Landmarker provides a flexible framework for landmark detection, allowing you to easily customize your model, loss function, and data loaders.
- **State-of-the-art**: Landmarker provides state-of-the-art landmark detection models and loss functions.

## 📈 Future Work
- Extension to landmark detection in videos.
- Add uncertainty estimation.
- ...

 ## 👪 Contributing

We welcome contributions to Landmarker. Please read the [contributing guidelines](CONTRIBUTING.md) for more information.

## 📖 Citation
If you use landmarker in your research, please cite the following paper:

J. Jonkers, L. Duchateau, G. V. Wallendael, and S. V. Hoecke, [**“landmarker: a Toolkit for Anatomical Landmark Localization in 2D/3D Images,”**](https://arxiv.org/abs/2501.10098) Jan. 17, 2025, arXiv: arXiv:2501.10098. doi: 10.48550/arXiv.2501.10098.

## 📝 License
Landmark is licensed under the MIT [license](LICENSE).

---

<p align="center">
👤 <i>Jef Jonkers</i>
</p>
