# Python
__pycache__/
*.py[cod]
*.so
*.egg
*.egg-info/
dist/
build/
.eggs/
.venv/
.uv/
.uv-cache/
.uv-env/

# Jupyter
.ipynb_checkpoints/

# macOS
.DS_Store

# Test/coverage
.coverage
htmlcov/
.tox/
pytest_cache/

# VSCode
.vscode/

# Docker
*.log
docker-compose.override.yml

# Misc
*.swp
*.bak

# Ignore BAM/FASTA test data
*.bam
*.bai
*.fa
*.fai
*.bed
