LICENCE
README.md
pyproject.toml
src/khloraascaf/__init__.py
src/khloraascaf/__main__.py
src/khloraascaf/assembly_graph.py
src/khloraascaf/cli.py
src/khloraascaf/exceptions.py
src/khloraascaf/inputs.py
src/khloraascaf/lib.py
src/khloraascaf/multiplied_doubled_contig_graph.py
src/khloraascaf/outputs.py
src/khloraascaf/py.typed
src/khloraascaf/result.py
src/khloraascaf/run_metadata.py
src/khloraascaf/scaffolding_methods.py
src/khloraascaf/utils_debug.py
src/khloraascaf.egg-info/PKG-INFO
src/khloraascaf.egg-info/SOURCES.txt
src/khloraascaf.egg-info/dependency_links.txt
src/khloraascaf.egg-info/requires.txt
src/khloraascaf.egg-info/top_level.txt
src/khloraascaf/ilp/__init__.py
src/khloraascaf/ilp/dirf_sets.py
src/khloraascaf/ilp/invf_sets.py
src/khloraascaf/ilp/pulp_circuit.py
src/khloraascaf/ilp/pulp_max_dirf.py
src/khloraascaf/ilp/pulp_max_invf.py
src/khloraascaf/ilp/pulp_max_presscore.py
src/khloraascaf/ilp/pulp_repeated_fragments.py
src/khloraascaf/ilp/pulp_to_solver.py
src/khloraascaf/ilp/pulp_var_db.py
tests/test_assembly_graph.py
tests/test_exceptions.py
tests/test_outputs.py
tests/test_toy_examples.py
tests/test_utils_debug.py