LICENSE
README.md
setup.py
jinxif/__init__.py
jinxif/_version.py
jinxif/afsub.py
jinxif/basic.py
jinxif/codex.py
jinxif/configure.py
jinxif/feat.py
jinxif/hack.py
jinxif/imgmeta.py
jinxif/jfplt.py
jinxif/keypointregist.py
jinxif/mics.py
jinxif/regist.py
jinxif/sane.py
jinxif/segment.py
jinxif/stitch.py
jinxif/thresh.py
jinxif/util.py
jinxif.egg-info/PKG-INFO
jinxif.egg-info/SOURCES.txt
jinxif.egg-info/dependency_links.txt
jinxif.egg-info/requires.txt
jinxif.egg-info/top_level.txt
jinxif/galaxy/mpleximage_01_1_sane_czi_original_slide.py
jinxif/galaxy/mpleximage_01_1_sane_czi_original_slide.xml
jinxif/galaxy/mpleximage_01_2_sane_czi_splitscene_slide.py
jinxif/galaxy/mpleximage_01_2_sane_czi_splitscene_slide.xml
jinxif/galaxy/mpleximage_01_3_sane_tiff_raw_slide.py
jinxif/galaxy/mpleximage_01_3_sane_tiff_raw_slide.xml
jinxif/galaxy/mpleximage_01_4_sane_visualize_raw_images_slidemscene.py
jinxif/galaxy/mpleximage_01_4_sane_visualize_raw_images_slidemscene.xml
jinxif/galaxy/mpleximage_02_1_imgmeta_fetch_meta_slide.py
jinxif/galaxy/mpleximage_02_1_imgmeta_fetch_meta_slide.xml
jinxif/galaxy/mpleximage_02_2_util_tma_grid_slide.py
jinxif/galaxy/mpleximage_02_2_util_tma_grid_slide.xml
jinxif/galaxy/mpleximage_03_2_sane_tiff_reg_slide.py
jinxif/galaxy/mpleximage_03_2_sane_tiff_reg_slide.xml
jinxif/galaxy/mpleximage_03_3_regist_visualize_reg_images_slidepxscene.py
jinxif/galaxy/mpleximage_03_3_regist_visualize_reg_images_slidepxscene.xml
jinxif/galaxy/mpleximage_04_1_exposuretime_qc_batch.py
jinxif/galaxy/mpleximage_04_1_exposuretime_qc_batch.xml
jinxif/galaxy/mpleximage_04_2_exposuretime_correct_slidepxscene.py
jinxif/galaxy/mpleximage_04_2_exposuretime_correct_slidepxscene.xml
jinxif/galaxy/mpleximage_05_1_basic_marker_table_slidepxscene.py
jinxif/galaxy/mpleximage_05_1_basic_marker_table_slidepxscene.xml
jinxif/galaxy/mpleximage_06_1_afsub_auto_fluorescent_subtraction_slidepxscene.py
jinxif/galaxy/mpleximage_06_1_afsub_auto_fluorescent_subtraction_slidepxscene.xml
jinxif/galaxy/mpleximage_07_1_segmentation_nuc_slidepxscene.py
jinxif/galaxy/mpleximage_07_1_segmentation_nuc_slidepxscene.xml
jinxif/galaxy/mpleximage_07_2_segmentation_cell_slidepxscene.py
jinxif/galaxy/mpleximage_07_2_segmentation_cell_slidepxscene.xml
jinxif/galaxy/mpleximage_07_3_segmentation_match_slidepxscene.py
jinxif/galaxy/mpleximage_07_3_segmentation_match_slidepxscene.xml
jinxif/galaxy/mpleximage_08_1_threshold_auto_slidepxscene.py
jinxif/galaxy/mpleximage_08_1_threshold_auto_slidepxscene.xml
jinxif/galaxy/mpleximage_09_1_feature_extraction_slidepxscene.py
jinxif/galaxy/mpleximage_09_1_feature_extraction_slidepxscene.xml
jinxif/galaxy/mpleximage_09_2_feature_filter_slidepxscene.py
jinxif/galaxy/mpleximage_09_2_feature_filter_slidepxscene.xml
jinxif/galaxy/mpleximage_09_3_feature_correction_label_slidepxscene.py
jinxif/galaxy/mpleximage_09_3_feature_correction_label_slidepxscene.xml
jinxif/galaxy/mpleximage_10_1_segmentation_nuccell_zproj_label_qc_slidepxscene.py
jinxif/galaxy/mpleximage_10_1_segmentation_nuccell_zproj_label_qc_slidepxscene.xml
jinxif/src/template_afsubtraction_slide.py
jinxif/src/template_exposuretimecorrect_slidepxscene.py
jinxif/src/template_extractfeatures_slide.py
jinxif/src/template_featurecorrectlabels_slide.py
jinxif/src/template_filterfeatures_slide.py
jinxif/src/template_micspatch_slide.py
jinxif/src/template_micstrafo_batch.py
jinxif/src/template_nuccellzprojlabel_slide.py
jinxif/src/template_registration_mscene.m
jinxif/src/template_registration_mscene.py
jinxif/src/template_segmentation_match.py
jinxif/src/template_segmentation_nuccell.py
jinxif/src/template_thresh_slide.py
jinxif/src/template_vizrawimage_slide.py
jinxif/src/template_vizregimage_slide.py
jinxif/src/template_xzcompress_slide.py
jinxif/src/template_xzdecompress_slide.py