.bumpversion.cfg
.cookiecutterrc
.coveragerc
.editorconfig
.pylintrc
.travis.yml
AUTHORS.rst
CHANGELOG.rst
CONTRIBUTING.rst
LICENSE
MANIFEST.in
README.rst
appveyor.yml
motivation.png
setup.cfg
setup.py
tox.ini
ci/appveyor-bootstrap.py
ci/appveyor-download.py
ci/appveyor-with-compiler.cmd
ci/bootstrap.py
ci/templates/.travis.yml
ci/templates/appveyor.yml
docs/Motivation.svg
docs/authors.rst
docs/changelog.rst
docs/conf.py
docs/contributing.rst
docs/coverage.png
docs/custom_scorer.rst
docs/dna_peak.png
docs/index.rst
docs/janggu_example.png
docs/janggu_main.png
docs/motivation.png
docs/readme.rst
docs/requirements.txt
docs/spelling_wordlist.txt
docs/storage.rst
docs/tutorial.rst
docs/reference/index.rst
docs/reference/janggu.data.rst
docs/reference/janggu.rst
src/examples/classify_bedregions.py
src/examples/classify_bedregions_w_keras.py
src/examples/classify_fasta.py
src/examples/plot_coverage.py
src/janggu/__init__.py
src/janggu/__main__.py
src/janggu/cli.py
src/janggu/decorators.py
src/janggu/evaluation.py
src/janggu/layers.py
src/janggu/losses.py
src/janggu/model.py
src/janggu/utils.py
src/janggu.egg-info/PKG-INFO
src/janggu.egg-info/SOURCES.txt
src/janggu.egg-info/dependency_links.txt
src/janggu.egg-info/entry_points.txt
src/janggu.egg-info/not-zip-safe
src/janggu.egg-info/requires.txt
src/janggu.egg-info/top_level.txt
src/janggu/data/__init__.py
src/janggu/data/coverage.py
src/janggu/data/data.py
src/janggu/data/dna.py
src/janggu/data/genomic_indexer.py
src/janggu/data/genomicarray.py
src/janggu/data/nparr.py
src/janggu/resources/10regions.bed
src/janggu/resources/bed_test.bed
src/janggu/resources/positive.bed
src/janggu/resources/pseudo_genome.fa
src/janggu/resources/region_w_strand.bed
src/janggu/resources/roi_test.bed
src/janggu/resources/roi_train.bed
src/janggu/resources/sample.bam
src/janggu/resources/sample.bam.bai
src/janggu/resources/sample.bed
src/janggu/resources/sample.bw
src/janggu/resources/sample.chrom.sizes
src/janggu/resources/sample.csv
src/janggu/resources/sample.fa
src/janggu/resources/sample.gtf
src/janggu/resources/sample2.bam
src/janggu/resources/sample2.bam.bai
src/janggu/resources/sample2.fa
src/janggu/resources/sample2_test.fa
src/janggu/resources/sample_equalsize.bed
src/janggu/resources/sample_genome.fa
src/janggu/resources/sample_protein.fa
src/janggu/resources/sample_test.fa
src/janggu/resources/scored_region.bed
src/janggu/resources/scored_sample.bed
src/janggu/resources/scores.bed
tests/__init__.py
tests/test_convertion.py
tests/test_coverage.py
tests/test_data.py
tests/test_decorators.py
tests/test_dna_dataset.py
tests/test_evaluation.py
tests/test_genomicarray.py
tests/test_gindexer.py
tests/test_janggo.py
tests/test_nparr.py
tests/test_utils.py