.gitattributes
.gitignore
.pre-commit-config.yaml
LICENSE.txt
MANIFEST.in
README.md
pyproject.toml
requirements.txt
.github/workflows/deploy.yml
.github/workflows/test.yml
scripts/biopython_options.py
scripts/biopython_simple.py
scripts/lists_options.py
scripts/lists_simple.py
src/itaxotools/pygblocks/__init__.py
src/itaxotools/pygblocks/steps.py
src/itaxotools/pygblocks/types.py
src/itaxotools_pygblocks.egg-info/PKG-INFO
src/itaxotools_pygblocks.egg-info/SOURCES.txt
src/itaxotools_pygblocks.egg-info/dependency_links.txt
src/itaxotools_pygblocks.egg-info/requires.txt
src/itaxotools_pygblocks.egg-info/top_level.txt
tests/test_column_analysis.py
tests/test_files.py
tests/test_flank_rejection.py
tests/test_gap_rejection.py
tests/test_length_rejection.py
tests/test_mask_creation.py
tests/test_nonconserved_rejection.py
tests/test_sequence_trimming.py
tests/test_files/cox2.pir
tests/test_files/cox2.pir-gb
tests/test_files/cox2.pir-gbMask
tests/test_files/cox2.pir-gbv
tests/test_files/cox2.pir-gbvMask
tests/test_files/cytb.pir
tests/test_files/cytb.pir-gb
tests/test_files/cytb.pir-gbMask
tests/test_files/cytb.pir-gbv
tests/test_files/cytb.pir-gbvMask
tests/test_files/mafft.fas
tests/test_files/mafft.fas-gb
tests/test_files/mafft.fas-gbMask
tests/test_files/nad3.pir
tests/test_files/nad3.pir-gb
tests/test_files/nad3.pir-gbMask
tests/test_files/nad3.pir-gbv
tests/test_files/nad3.pir-gbvMask
tests/test_files/nad5.pir
tests/test_files/nad5.pir-gb
tests/test_files/nad5.pir-gbMask
tests/test_files/nad5.pir-gbv
tests/test_files/nad5.pir-gbvMask