# Copyright (c) 2016-2019. Mount Sinai School of Medicine
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

from __future__ import print_function, division, absolute_import

__version__ = "1.0.10"


from .allele_read import AlleleRead
from .dataframe_helpers import isovar_results_to_dataframe
from .isovar_result import IsovarResult
from .locus_read import LocusRead
from .main import run_isovar
from .protein_sequence import ProteinSequence
from .protein_sequence_creator import ProteinSequenceCreator
from .read_collector import ReadCollector
from .read_evidence import ReadEvidence
from .variant_orf import VariantORF
from .variant_sequence import VariantSequence
from .variant_sequence_creator import VariantSequenceCreator


__all__ = [
    "run_isovar",
    "isovar_results_to_dataframe",
    "AlleleRead",
    "IsovarResult",
    "LocusRead",
    "ProteinSequence",
    "ProteinSequenceCreator",
    "ReadCollector",
    "ReadEvidence",
    "VariantORF",
    "VariantSequence",
    "VariantSequenceCreator",
]
