6:th5:e_coli.mc4 running "influx_s.py --sens mc=4 --seed 7 --np 4 cases/e_coli_3_" ...
3:th2:e_coli_i_emu running "influx_i.py --emu cases/e_coli_i_1_" ...
1:th0:e_coli running "influx_s.py cases/e_coli" ...
5:th4:e_coli.emu running "influx_s.py --emu cases/e_coli_2_" ...
7:th6:e_coli.emu.mc4 running "influx_s.py --emu --sens mc=4 --seed 7 --np 4 cases/e_coli_4_" ...
4:th3:e_coli.noopt running "influx_s.py --noopt cases/e_coli_1_" ...
8:th7:e_coli_i.mc4 running "influx_i.py --sens mc=4 --seed 777 --np 4 cases/e_coli_i_2_" ...
2:th1:e_coli_i running "influx_i.py cases/e_coli_i" ...
done 1:th0:e_coli (6.47 s)
9:th0:e_coli_i.mc4.np1 running "influx_i.py --sens mc=4 --seed 7 --np 1 cases/e_coli_i_3_" ...
done 4:th3:e_coli.noopt (6.56 s)
10:th3:e_coli_i.emu.mc4 running "influx_i.py --sens mc=4 --emu --seed 7 --np 4 cases/e_coli_i_4_" ...
done 5:th4:e_coli.emu (6.57 s)
11:th4:e_coli_NA running "influx_s.py cases/e_coli_NA" ...
done 7:th6:e_coli.emu.mc4 (11.74 s)
12:th6:e_coli_growth running "influx_s.py cases/e_coli_growth" ...
done 6:th5:e_coli.mc4 (12.25 s)
13:th5:e_coli_BM_eqs running "influx_s.py cases/Modele_GC-AAprot_BM_pmi_SSOtest" ...
done 11:th4:e_coli_NA (6.28 s)
14:th4:utf8_BOM running "ftbl2netan.py cases/e_coli_growth_utf8 > cases/e_coli_growth_utf8.netan" ...
done 14:th4:utf8_BOM (0.84 s)
15:th4:constr_ineq_clownr running "influx_s.py cases/explicit_ineq_constr_flux" ...
done 15:th4:constr_ineq_clownr (4.60 s)
16:th4:spe_char running "influx_s.py cases/spe_char_flux" ...
done 12:th6:e_coli_growth (7.34 s)
17:th6:long_reac running "influx_s.py --fullsys cases/long_reac" ...
done 2:th1:e_coli_i (22.96 s)
18:th1:e_coli_prl running "influx_s.py cases/e_coli_glc1-6n" ...
done 16:th4:spe_char (5.58 s)
19:th4:e_coli_i_prl running "influx_i.py cases/e_coli_GX_prl" ...
done 17:th6:long_reac (5.03 s)
20:th6:xml_ecoli running "ftbl2metxml.py cases/e_coli" ...
done 3:th2:e_coli_i_emu (25.22 s)
21:th2:h_sapiens_pf running "influx_s.py cases/h_sapiens" ...
done 20:th6:xml_ecoli (5.02 s)
22:th6:dzwf_nbc0 running "influx_s.py cases/Dzwf_1" ...
done 13:th5:e_coli_BM_eqs (26.52 s)
23:th5:prl_exp_mc running "influx_s.py --sens mc=4 cases/e_coli_1-Glc_exact" ...
done 22:th6:dzwf_nbc0 (24.88 s)
24:th6:utf16 running "ftbl2netan.py cases/UTF16.ftbl" ...
done 23:th5:prl_exp_mc (16.51 s)
25:th5:utf32 running "ftbl2netan.py cases/UTF32.ftbl" ...
done 24:th6:utf16 (2.10 s)
26:th6:mc_prl_weighted_pools running "influx_s.py cases/mc_prl_weighted_pools.ftbl" ...
done 25:th5:utf32 (1.87 s)
27:th5:sln_use running "influx_s.py --sln cases/model_Man-Bio12" ...
done 21:th2:h_sapiens_pf (39.12 s)
28:th2:dim_fixed running "influx_i.py cases/methanol_v1.ftbl" ...
done 8:th7:e_coli_i.mc4 (70.20 s)
29:th7:na_grad running "influx_i.py cases/methanol_v2.2_bio1" ...
done 27:th5:sln_use (21.61 s)
30:th5:err.too_many_dep_fluxes running "influx_s.py cases/branching-2014-09-01" ...
done 30:th5:err.too_many_dep_fluxes (2.24 s)
31:th5:err.too_many_free_fluxes.1 running "influx_s.py cases/branching_MS" ...
done 31:th5:err.too_many_free_fluxes.1 (2.11 s)
32:th5:err.too_many_free_fluxes.2 running "influx_s.py cases/err_extra_ff-2014-04-02" ...
done 32:th5:err.too_many_free_fluxes.2 (4.56 s)
33:th5:err.no_dep_fluxes running "influx_s.py cases/no_dep_fluxes" ...
done 33:th5:err.no_dep_fluxes (0.56 s)
34:th5:err.lack_fluxval running "influx_s.py cases/err_lack_fluxval" ...
done 34:th5:err.lack_fluxval (0.44 s)
35:th5:err.depflux_zero-2014-04-02 running "influx_s.py cases/err_depflux_zero-2014-04-02" ...
done 18:th1:e_coli_prl (70.07 s)
36:th1:err.lindep_rows-2014-04-02 running "influx_s.py cases/err_lindep_rows-2014-04-02" ...
done 28:th2:dim_fixed (30.42 s)
37:th2:err.jac_rank_deficient running "influx_s.py cases/err_jac_rank_def" ...
done 35:th5:err.depflux_zero-2014-04-02 (6.29 s)
38:th5:err.singular_stoech running "influx_s.py cases/err_singular_stoech" ...
done 36:th1:err.lindep_rows-2014-04-02 (2.15 s)
39:th1:err.dev_zero running "influx_s.py cases/err_dev_zero" ...
done 39:th1:err.dev_zero (0.36 s)
40:th1:err.rep_let running "influx_s.py cases/rep_let" ...
done 40:th1:err.rep_let (0.34 s)
41:th1:err.bad_map running "influx_s.py cases/bad_map" ...
done 41:th1:err.bad_map (0.38 s)
42:th1:err.tr_miss running "influx_s.py cases/err_trans_missing" ...
done 42:th1:err.tr_miss (0.33 s)
43:th1:input1C running "influx_i.py cases/input1C_i.ftbl" ...
done 38:th5:err.singular_stoech (2.10 s)
44:th5:ffguess running "influx_i.py cases/ffguess_i.ftbl" ...
done 37:th2:err.jac_rank_deficient (4.82 s)
45:th2:rdep running "influx_s.py --install_rdep" ...
done 26:th6:mc_prl_weighted_pools (44.94 s)
46:th6:exe running "influx_s --version" ...
done 46:th6:exe (0.11 s)
47:th6:exei running "influx_i --version" ...
done 47:th6:exei (0.11 s)
48:th6:ff2ftbl running "ff2ftbl cases/e_coli > cases/e_coli_ff.ftbl" ...
done 48:th6:ff2ftbl (0.17 s)
49:th6:Rreprod running "influx_s --nocalc cases/e_coli && mv -f cases/e_coli.R cases/e_coli.R1 && influx_s --nocalc cases/e_coli && [ "$(tail -n +5 cases/e_coli.R | md5sum)" == "$(tail -n +5 cases/e_coli.R1 | md5sum)" ] && rm -f cases/e_coli.R1" ...
done 49:th6:Rreprod (1.62 s)
50:th6:pso running "influx_s.py cases/e_coli_pso.ftbl" ...
done 44:th5:ffguess (6.89 s)
done 43:th1:input1C (7.61 s)
done 45:th2:rdep (5.42 s)
done 9:th0:e_coli_i.mc4.np1 (102.52 s)
done 50:th6:pso (10.37 s)
done 19:th4:e_coli_i_prl (95.40 s)
done 10:th3:e_coli_i.emu.mc4 (119.98 s)
done 29:th7:na_grad (139.33 s)
---
In total, run 50 test of which 0 failed. (209.73 s)
