Metadata-Version: 2.1
Name: infect-net-inference
Version: 0.0.2
Summary: Simulate an infection process on a graph as well as create a credible set for the patient zero given a set of infected nodes on a graph.
Home-page: https://github.com/hltung/infection/tree/adjust-k
Author: Min Xu and Hwai-Liang Tung
Author-email: hwai-liang_tung@brown.edu
License: UNKNOWN
Platform: UNKNOWN
Description-Content-Type: text/markdown
Provides-Extra: dev
Requires-Dist: pytest (>=3.7) ; extra == 'dev'

# Infection

This package will allow you to create a credible set for the patient zero given a set of infected nodes on a graph.

## Installation

Run the following to install:

```python
pip install infect-net-inference
```

## Usage

```python
from infect_tools_noisy_conv import *

# Simulate an infection on graf. Outputs a list containing the infected nodes in the order they were infected 
order = simulateInfection(graf, first, n_inf, q) 

# Create a dict mapping each node index to the posterior root probability
freq = inferInfection(foo, q, **mcmc_params)


```


