numpy<2.0.0
pandas
PyYAML>=5.3
scikit-learn>=0.23
matplotlib>=3.1
editdistance
regex
tzlocal
airr<1.4,>=1
pystache
dill>=0.3
plotly>=4
matplotlib-venn>=0.11
scipy<1.13
bionumpy>=0.2.31
umap-learn
olga

[DL]
torch
keras
tensorflow
logomaker
gensim

[KerasSequenceCNN]
keras==2.11.0
tensorflow==2.11.0

[TCRdist]
tcrdist3>=0.1.6

[all]
tcrdist3
sonnia
torch
stitchr
IMGTgeneDL
keras
tensorflow
fisher
logomaker
fishersapi
gensim

[fisher]
fisher
fishersapi

[gen_models]
sonnia
torch

[ligo]
stitchr
IMGTgeneDL

[word2vec]
gensim
