MANIFEST.in
README.md
requirements.txt
setup.py
img_pipe/.DS_Store
img_pipe/.xdebug_mris_curvature_stats
img_pipe/__init__.py
img_pipe/__init__.pyc
img_pipe/dependencies.sh
img_pipe/img_pipe.py
img_pipe/img_pipe.pyc
img_pipe/pyscript.m
img_pipe.egg-info/PKG-INFO
img_pipe.egg-info/SOURCES.txt
img_pipe.egg-info/dependency_links.txt
img_pipe.egg-info/requires.txt
img_pipe.egg-info/top_level.txt
img_pipe/SupplementalFiles/FS_colorLUT.py
img_pipe/SupplementalFiles/FS_colorLUT.pyc
img_pipe/SupplementalFiles/FreeSurferLUTRGBValues.npy
img_pipe/SupplementalFiles/FreeSurferLookupTable
img_pipe/SupplementalFiles/__init__.py
img_pipe/SupplementalFiles/clingrid_inds.mat
img_pipe/SupplementalFiles/cvs_avg35_inMNI152_affine_subj.txt
img_pipe/SupplementalScripts/aseg2srf.sh
img_pipe/SupplementalScripts/electrode_picker.py
img_pipe/plotting/__init__.py
img_pipe/plotting/ctmr_brain_plot.py
img_pipe/plotting/ctmr_brain_plot_example.ipynb
img_pipe/plotting/ctmr_brain_plot_simple_example.ipynb
img_pipe/plotting/ctmr_gauss_plot.m
img_pipe/plotting/el_add.m
img_pipe/plotting/loc_colormap.mat
img_pipe/plotting/loc_view.m
img_pipe/plotting/plot_brain.py
img_pipe/plotting/plot_recon_anatomy.m
img_pipe/plotting/plot_recon_anatomy.py
img_pipe/plotting/plot_recon_anatomy_compare_warped.m
img_pipe/plotting/tripatch.m
img_pipe/surface_warping_scripts/.DS_Store
img_pipe/surface_warping_scripts/TriangleRayIntersection.py
img_pipe/surface_warping_scripts/TriangleRayIntersection.pyc
img_pipe/surface_warping_scripts/__init__.py
img_pipe/surface_warping_scripts/__init__.pyc
img_pipe/surface_warping_scripts/alphavol.m
img_pipe/surface_warping_scripts/compare_warped_elecs.m
img_pipe/surface_warping_scripts/get_elecs_fromlabel.m
img_pipe/surface_warping_scripts/make_elec_label.m
img_pipe/surface_warping_scripts/make_elec_label.py
img_pipe/surface_warping_scripts/make_ofc_roi.m
img_pipe/surface_warping_scripts/make_outer_surf.py
img_pipe/surface_warping_scripts/make_outer_surf.pyc
img_pipe/surface_warping_scripts/nearest_electrode_vert.m
img_pipe/surface_warping_scripts/project_electrodes_anydirection.m
img_pipe/surface_warping_scripts/project_electrodes_anydirection.py
img_pipe/surface_warping_scripts/run_label2label.m
img_pipe/surface_warping_scripts/warp_elecs.m
img_pipe/surface_warping_scripts/warp_elecs.py
img_pipe/surface_warping_scripts/warp_elecs_wrapper.m
img_pipe/surface_warping_scripts/TriangleRayIntersection/PointInsideVolume.m
img_pipe/surface_warping_scripts/TriangleRayIntersection/TriangleRayIntersection.m
img_pipe/surface_warping_scripts/TriangleRayIntersection/TriangleRayIntersection_tutorial.m
img_pipe/surface_warping_scripts/TriangleRayIntersection/license.txt
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection.html
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial.html
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_01.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_02.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_03.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_04.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_05.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_06.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_07.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_eq30159.png
img_pipe/surface_warping_scripts/TriangleRayIntersection/html/TriangleRayIntersection_tutorial_eq37553.png