.gitignore
.gitlab-ci.yml
AUTHORS.md
LICENCE
README.rst
codemeta.json
pyproject.toml
ikiss/Snakefile
ikiss/VERSION
ikiss/__init__.py
ikiss/_version.py
ikiss/global_variables.py
ikiss/logo_ikiss.png
ikiss/main.py
ikiss/module.py
ikiss.egg-info/PKG-INFO
ikiss.egg-info/SOURCES.txt
ikiss.egg-info/dependency_links.txt
ikiss.egg-info/entry_points.txt
ikiss.egg-info/requires.txt
ikiss.egg-info/top_level.txt
ikiss/containers/Dockerfile
ikiss/containers/Singularity.ikiss_tools.def
ikiss/img/schema_pipeline_dag.pdf
ikiss/img/schema_pipeline_global1.pdf
ikiss/img/schema_pipeline_global2.pdf
ikiss/install_files/cluster_config_SLURM.yaml
ikiss/install_files/config.yaml
ikiss/install_files/tools_path.yaml
ikiss/notebooks/manhattan_plot_example.ipynb
ikiss/snakemake_scripts/get_versions.py
ikiss/snakemake_scripts/ikiss_report.py
ikiss/snakemake_scripts/kmer-bed2fastq.py
ikiss/snakemake_scripts/lfmm.R
ikiss/snakemake_scripts/outliers_and_position.py
ikiss/snakemake_scripts/pca_from_phenotype.py
ikiss/snakemake_scripts/pcadapt.R
ikiss/snakemake_scripts/report.py
ikiss/snakemake_scripts/run_ikiss.sbatch
ikiss/snakemake_scripts/split_bed.py