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misc/Singularity
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src/igdiscover/Snakefile
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src/igdiscover/align.py
src/igdiscover/cluster.py
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src/igdiscover/dna.py
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src/igdiscover/cli/dereplicate.py
src/igdiscover/cli/discover.py
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src/igdiscover/cli/germlinefilter.py
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