CODE_OF_CONDUCT.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
idptools_starling.egg-info/PKG-INFO
idptools_starling.egg-info/SOURCES.txt
idptools_starling.egg-info/dependency_links.txt
idptools_starling.egg-info/entry_points.txt
idptools_starling.egg-info/not-zip-safe
idptools_starling.egg-info/requires.txt
idptools_starling.egg-info/top_level.txt
starling/__init__.py
starling/_version.py
starling/configs.py
starling/py.typed
starling/utilities.py
starling/configs/configs.yaml
starling/configs/vae_configs.yaml
starling/configs/dataloader/dataloader.yaml
starling/configs/dataloader/vae_dataloader.yaml
starling/configs/diffusion/diffusion.yaml
starling/configs/sequence_encoder/sequence_encoder.yaml
starling/configs/trainer/trainer.yaml
starling/configs/trainer/vae_trainer.yaml
starling/configs/unet/unet.yaml
starling/configs/vae_model/model.yaml
starling/data/VAE_loader_tar.py
starling/data/__init__.py
starling/data/argument_parser.py
starling/data/data_wrangler.py
starling/data/ddpm_loader_tar.py
starling/data/distributions.py
starling/data/positional_encodings.py
starling/data/schedulers.py
starling/data/tokenizer.py
starling/frontend/__init__.py
starling/frontend/ensemble_generation.py
starling/frontend/starling_viz.py
starling/inference/__init__.py
starling/inference/benchmark_mds.py
starling/inference/constraints.py
starling/inference/evaluate_vae.py
starling/inference/generation.py
starling/inference/model_loading.py
starling/models/__init__.py
starling/models/attention.py
starling/models/blocks.py
starling/models/continuous_diffusion.py
starling/models/diffusion.py
starling/models/ema.py
starling/models/normalization.py
starling/models/quantize.py
starling/models/resnets_original.py
starling/models/transformer.py
starling/models/unet.py
starling/models/vae.py
starling/models/vae_components.py
starling/models/vit.py
starling/samplers/__init__.py
starling/samplers/ddim_sampler.py
starling/samplers/ddpm_sampler.py
starling/samplers/plms_sampler.py
starling/scripts/__init__.py
starling/scripts/starling_converter.py
starling/scripts/starling_main_cli.py
starling/scripts/starling_pretokenize.py
starling/scripts/starling_search.py
starling/search/__init__.py
starling/search/builder.py
starling/search/search_engine.py
starling/search/search_utils.py
starling/search/similarity_search.py
starling/search/store.py
starling/structure/__init__.py
starling/structure/bme.py
starling/structure/coordinates.py
starling/structure/ensemble.py
starling/tests/__init__.py
starling/tests/test_sequence_encoder_backend.py
starling/tests/test_sequence_encoder_backend_integration.py
starling/tests/test_starling.py
starling/tests/test_tokenizer.py
starling/training/__init__.py
starling/training/diffusion_train.py
starling/training/vae_train.py