LICENSE
MANIFEST.in
README.md
dev_requirements.txt
history_matching_requirements.txt
pyproject.toml
requirements.txt
version.py
examples/__init__.py
examples/emod_hint_deprecated/OutputOption1/calibrate.py
examples/emod_hint_deprecated/OutputOption1/manifest.py
examples/emod_hint_deprecated/OutputOption1/model.py
examples/emod_hint_deprecated/OutputOption1/run_and_plot.py
examples/emod_hint_deprecated/OutputOption1/settings.py
examples/emod_hint_deprecated/OutputOption1/EP4/dtk_post_process.py
examples/emod_sir/OutputOption1/calibrate.py
examples/emod_sir/OutputOption1/manifest.py
examples/emod_sir/OutputOption1/settings.py
examples/emod_sir/OutputOption1/test_and_plot.py
examples/emod_sir/OutputOption1/EP4/dtk_post_process.py
examples/emod_sir/OutputOption2/calibrate.py
examples/emod_sir/OutputOption2/manifest.py
examples/emod_sir/OutputOption2/settings.py
examples/emod_sir/OutputOption2/test_and_plot.py
examples/emod_sir/OutputOption2/EP4/dtk_post_process.py
examples/emod_sir/OutputOption3/calibrate.py
examples/emod_sir/OutputOption3/manifest.py
examples/emod_sir/OutputOption3/model.py
examples/emod_sir/OutputOption3/settings.py
examples/emod_sir/OutputOption3/test_and_plot.py
examples/emod_sir/OutputOption3/EP4/dtk_post_process.py
examples/emod_sir/OutputOption4/calibrate.py
examples/emod_sir/OutputOption4/manifest.py
examples/emod_sir/OutputOption4/model.py
examples/emod_sir/OutputOption4/settings.py
examples/emod_sir/OutputOption4/test_and_plot.py
examples/emod_sir/OutputOption4/EP4/dtk_post_process.py
examples/emod_sis/OutputOption1/calibrate.py
examples/emod_sis/OutputOption1/manifest.py
examples/emod_sis/OutputOption1/settings.py
examples/emod_sis/OutputOption1/test_and_plot.py
examples/emod_sis/OutputOption1/EP4/dtk_post_process.py
examples/emod_sis/OutputOption2/calibrate.py
examples/emod_sis/OutputOption2/manifest.py
examples/emod_sis/OutputOption2/settings.py
examples/emod_sis/OutputOption2/test_and_plot.py
examples/emod_sis/OutputOption2/EP4/dtk_post_process.py
examples/sir/OutputOption1/calibrate.py
examples/sir/OutputOption1/settings.py
examples/sir/OutputOption1/bin/sir.py
examples/sir/OutputOption2/calibrate.py
examples/sir/OutputOption2/settings.py
examples/sir/OutputOption2/bin/sir.py
examples/solar/calibrate.py
examples/solar/plot.py
examples/solar/settings.py
examples/solar/bin/linear_model.py
idmtools_calibra/__init__.py
idmtools_calibra/calib_base_app.py
idmtools_calibra/calib_manager.py
idmtools_calibra/calib_site.py
idmtools_calibra/iteration_state.py
idmtools_calibra/process_state.py
idmtools_calibra/resample_manager.py
idmtools_calibra/rmse_site.py
idmtools_calibra/singularity_json_python_task.py
idmtools_calibra.egg-info/PKG-INFO
idmtools_calibra.egg-info/SOURCES.txt
idmtools_calibra.egg-info/dependency_links.txt
idmtools_calibra.egg-info/entry_points.txt
idmtools_calibra.egg-info/requires.txt
idmtools_calibra.egg-info/top_level.txt
idmtools_calibra/algorithms/__init__.py
idmtools_calibra/algorithms/fisher_inf_matrix.py
idmtools_calibra/algorithms/generic_iterative_next_point.py
idmtools_calibra/algorithms/gpc.py
idmtools_calibra/algorithms/imis.py
idmtools_calibra/algorithms/next_point_algorithm.py
idmtools_calibra/algorithms/optim_tool.py
idmtools_calibra/algorithms/optim_tools_pspo.py
idmtools_calibra/algorithms/optim_tools_spsa.py
idmtools_calibra/algorithms/separatrix_bhm.py
idmtools_calibra/algorithms/pbnb/__init__.py
idmtools_calibra/algorithms/pbnb/c_sub_region.py
idmtools_calibra/algorithms/pbnb/fun_pbnb_support_functions.py
idmtools_calibra/algorithms/pbnb/m_intial_paramters_setting.py
idmtools_calibra/algorithms/pbnb/optim_tool_pbnb.py
idmtools_calibra/analyzers/__init__.py
idmtools_calibra/analyzers/base_calibration_analyzer.py
idmtools_calibra/analyzers/rmse_analyzer.py
idmtools_calibra/cli/__init__.py
idmtools_calibra/cli/commands.py
idmtools_calibra/cli/utils.py
idmtools_calibra/output/__init__.py
idmtools_calibra/output/spatial_output.py
idmtools_calibra/plotters/__init__.py
idmtools_calibra/plotters/base_plotter.py
idmtools_calibra/plotters/likelihood_plotter.py
idmtools_calibra/plotters/optim_tool_pbnb_plotter.py
idmtools_calibra/plotters/optim_tool_plotter.py
idmtools_calibra/plotters/optim_tool_spsa_plotter.py
idmtools_calibra/plotters/separatrix_bhm_plotter.py
idmtools_calibra/plotters/site_data_plotter.py
idmtools_calibra/resamplers/__init__.py
idmtools_calibra/resamplers/base_resampler.py
idmtools_calibra/resamplers/calibration_point.py
idmtools_calibra/resamplers/calibration_points.py
idmtools_calibra/resamplers/cramer_rao_resampler.py
idmtools_calibra/resamplers/random_perturbation_resampler.py
idmtools_calibra/utilities/__init__.py
idmtools_calibra/utilities/display.py
idmtools_calibra/utilities/distro.py
idmtools_calibra/utilities/encoding.py
idmtools_calibra/utilities/helper.py
idmtools_calibra/utilities/ll_all_generator.py
idmtools_calibra/utilities/ll_calculators.py
idmtools_calibra/utilities/mod_fn.py
idmtools_calibra/utilities/parameter_set.py
idmtools_calibra/utilities/prior.py
idmtools_calibra/utilities/resume_manager.py
idmtools_calibra/utilities/parsers/JSON.py
idmtools_calibra/utilities/parsers/__init__.py
idmtools_calibra/utilities/parsers/bin2np.py
idmtools_calibra/utilities/parsers/dict2pd.py
idmtools_calibra/utilities/parsers/malaria_summary.py
idmtools_calibra/utilities/parsers/np2json.py
idmtools_calibra/utilities/parsers/np2pd.py
idmtools_calibra/utilities/parsers/pd2csv.py