LICENSE.md
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
hydra_genetics/__init__.py
hydra_genetics/__main__.py
hydra_genetics.egg-info/PKG-INFO
hydra_genetics.egg-info/SOURCES.txt
hydra_genetics.egg-info/dependency_links.txt
hydra_genetics.egg-info/entry_points.txt
hydra_genetics.egg-info/not-zip-safe
hydra_genetics.egg-info/requires.txt
hydra_genetics.egg-info/top_level.txt
hydra_genetics/commands/__init__.py
hydra_genetics/commands/create.py
hydra_genetics/pipeline-template/.gitignore
hydra_genetics/pipeline-template/LICENSE.md
hydra_genetics/pipeline-template/README.md
hydra_genetics/pipeline-template/requirements.test.txt
hydra_genetics/pipeline-template/requirements.txt
hydra_genetics/pipeline-template/.github/CODEOWNERS
hydra_genetics/pipeline-template/.github/ISSUE_TEMPLATE/bug_report.md
hydra_genetics/pipeline-template/.github/ISSUE_TEMPLATE/feature_request.md
hydra_genetics/pipeline-template/.github/linters/.snakefmt.toml
hydra_genetics/pipeline-template/.github/linters/report/.gitkeep
hydra_genetics/pipeline-template/.github/workflows/integration1.yaml
hydra_genetics/pipeline-template/.github/workflows/lint.yaml
hydra_genetics/pipeline-template/.github/workflows/pycodestyl.yaml
hydra_genetics/pipeline-template/.github/workflows/pytest.yaml
hydra_genetics/pipeline-template/.github/workflows/snakefmt.yaml
hydra_genetics/pipeline-template/.github/workflows/snakemake-dry-run.yaml
hydra_genetics/pipeline-template/.tests/integration/config.yaml
hydra_genetics/pipeline-template/.tests/integration/resources.yaml
hydra_genetics/pipeline-template/.tests/integration/samples.tsv
hydra_genetics/pipeline-template/.tests/integration/units.tsv
hydra_genetics/pipeline-template/config/config.yaml
hydra_genetics/pipeline-template/config/resources.yaml
hydra_genetics/pipeline-template/config/samples.tsv
hydra_genetics/pipeline-template/config/units.tsv
hydra_genetics/pipeline-template/images/generate_dag.txt
hydra_genetics/pipeline-template/workflow/Snakefile
hydra_genetics/pipeline-template/workflow/envs/dummy.yaml
hydra_genetics/pipeline-template/workflow/notebooks/describe_jupyter_notebook.txt
hydra_genetics/pipeline-template/workflow/report/describe_workflow.rst
hydra_genetics/pipeline-template/workflow/rules/common.smk
hydra_genetics/pipeline-template/workflow/schemas/config.schema.yaml
hydra_genetics/pipeline-template/workflow/schemas/resources.schema.yaml
hydra_genetics/pipeline-template/workflow/schemas/samples.schema.yaml
hydra_genetics/pipeline-template/workflow/schemas/units.schema.yaml
hydra_genetics/pipeline-template/workflow/scripts/dummy.py
hydra_genetics/pipeline-template/workflow/scripts/test_dummy.py
hydra_genetics/rule-template/skeleton_env.yaml
hydra_genetics/rule-template/skeleton_rule.smk
hydra_genetics/utils/__init__.py
hydra_genetics/utils/misc.py
hydra_genetics/utils/resources.py
hydra_genetics/utils/samples.py
hydra_genetics/utils/units.py
tests/__init__.py
tests/utils/__init__.py
tests/utils/test_misc.py
tests/utils/test_resources.py
tests/utils/test_samples.py
tests/utils/test_units.py