README.md
setup.py
hits/__init__.py
hits/adapters.py
hits/adapters_cython.pyx
hits/annotation.py
hits/bus.py
hits/external_sort.py
hits/fasta.py
hits/fastq.py
hits/fastq_cython.pyx
hits/genetic_code.py
hits/genomes.py
hits/gff.py
hits/intensities_illumina.py
hits/interval.py
hits/ipython.py
hits/mapping_tools.py
hits/paired_end.py
hits/sam.py
hits/sw.py
hits/sw_cython.pyx
hits/utilities.py
hits/variants.py
hits/visualize_structure.py
hits.egg-info/PKG-INFO
hits.egg-info/SOURCES.txt
hits.egg-info/dependency_links.txt
hits.egg-info/requires.txt
hits.egg-info/top_level.txt
hits/visualize/__init__.py
hits/visualize/define_igv_colors.py
hits/visualize/fastq.py
hits/visualize/gels.py
hits/visualize/interactive/__init__.py
hits/visualize/interactive/example_df.txt
hits/visualize/interactive/external_coffeescript.py
hits/visualize/interactive/pc.py
hits/visualize/interactive/pc_box_select.coffee
hits/visualize/interactive/pc_clear.coffee
hits/visualize/interactive/pc_hover.coffee
hits/visualize/interactive/pc_search.coffee
hits/visualize/interactive/pc_selection.coffee
hits/visualize/interactive/scatter_alpha.coffee
hits/visualize/interactive/scatter_annotation_button.coffee
hits/visualize/interactive/scatter_case_sensitive.coffee
hits/visualize/interactive/scatter_cluster_button.coffee
hits/visualize/interactive/scatter_color.coffee
hits/visualize/interactive/scatter_grid.coffee
hits/visualize/interactive/scatter_heatmap.coffee
hits/visualize/interactive/scatter_label.coffee
hits/visualize/interactive/scatter_label_button.coffee
hits/visualize/interactive/scatter_menu.coffee
hits/visualize/interactive/scatter_range.coffee
hits/visualize/interactive/scatter_save_button.coffee
hits/visualize/interactive/scatter_search.coffee
hits/visualize/interactive/scatter_selection.coffee
hits/visualize/interactive/scatter_size.coffee
hits/visualize/interactive/scatter_size_menu.coffee
hits/visualize/interactive/scatter_subset_menu.coffee
hits/visualize/interactive/scatter_two_level_menu.coffee
hits/visualize/interactive/scatter_zoom_to_data.coffee
hits/visualize/interactive/screen_errorbars_button.coffee
hits/visualize/interactive/screen_menu.coffee
hits/visualize/interactive/screen_range.coffee
hits/visualize/interactive/screen_scatter_selection.coffee
hits/visualize/interactive/screen_search.coffee
hits/visualize/interactive/screen_significance_filter.coffee