README.md
setup.py
HiNT/ArgsValidator.py
HiNT/BPsummarization.py
HiNT/DoRegressionAllchroms.py
HiNT/HiCprocessingPip.py
HiNT/__init__.py
HiNT/coolToMatrix.py
HiNT/corelib.py
HiNT/diff.py
HiNT/doBICseq.py
HiNT/getBPfromChimericReads.py
HiNT/getGenomeRowSumsFromCool.py
HiNT/getGenomeRowSumsFromHiC.py
HiNT/getRankProduct.py
HiNT/getRoughBreakpoints.py
HiNT/hicToMatrix.py
HiNT/prepare_regression.py
HiNT/read_hic_header.py
HiNT/runhint.py
HiNT/straw.py
HiNT_Package.egg-info/PKG-INFO
HiNT_Package.egg-info/SOURCES.txt
HiNT_Package.egg-info/dependency_links.txt
HiNT_Package.egg-info/requires.txt
HiNT_Package.egg-info/top_level.txt
bin/hint