.coveragerc
.dockerignore
ARCHITECTURE.md
CHANGELOG.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
README_MCP.md
V2.0_RELEASE_READY.md
clean_build.sh
pyproject.toml
requirements.txt
test_kmeans_diagnostics.py
validate_stability_metrics.py
.github/workflows/ci.yml
.github/workflows/performance.yml
.github/workflows/publish.yml
docker/Dockerfile
docker/Dockerfile.pypi
docker/README.md
docker/docker-compose.yml
docs/advanced/case-studies.md
docs/advanced/community-examples.md
docs/advanced/features.md
docs/advanced/optimization.md
docs/advanced/trading.md
docs/archive/README.md
docs/archive/online_hmm.md
docs/archive/phase3_architecture.md
docs/archive/state_standardization.md
docs/experimental/API_REFERENCE.md
docs/experimental/BEST_PRACTICES_AND_FAQ.md
docs/experimental/QC_ROADMAP.md
docs/experimental/QUANTCONNECT_INSTALLATION.md
docs/experimental/QUANTCONNECT_PHASE1_COMPLETE.md
docs/experimental/QUANTCONNECT_PHASE2_COMPLETE.md
docs/experimental/QUANTCONNECT_PHASE3_COMPLETE.md
docs/experimental/QUANTCONNECT_PHASE4_COMPLETE.md
docs/experimental/QUANTCONNECT_PHASE5_COMPLETE.md
docs/experimental/QUANTCONNECT_PHASE6_COMPLETE.md
docs/experimental/QUANTCONNECT_PHASE7_COMPLETE.md
docs/experimental/README.md
docs/experimental/alpha-strategy-notes.md
docs/guides/SETUP_LINUX.md
docs/guides/SETUP_MACOS.md
docs/guides/SETUP_WINDOWS.md
docs/guides/configuration.md
docs/guides/quickstart.md
docs/guides/troubleshooting.md
docs/integrations/mcp/README.md
docs/integrations/mcp/prompts-spec.md
docs/integrations/mcp/roadmap.md
docs/reference/MIGRATION_2.0.md
docs/reference/deployment.md
docs/reference/error-handling.md
docs/reference/mathematical-foundations.md
examples/README.md
examples/analyze_2008_regime_statistics.py
examples/analyze_dotcom_regime_statistics.py
examples/case_study_2008_financial_crisis.py
examples/case_study_dotcom_2000.py
examples/advanced/financial_case_study.py
examples/advanced/improved_features.py
examples/advanced/initialization_methods_demo.py
examples/advanced/multi_timeframe_example.py
examples/advanced/regime_quality_validation.py
examples/case_studies/analyze_2008_regime_statistics.py
examples/case_studies/analyze_dotcom_regime_statistics.py
examples/case_studies/analyze_timeframe_persistence.py
examples/case_studies/case_study_2008_financial_crisis.py
examples/case_studies/case_study_covid_2020.py
examples/case_studies/case_study_dotcom_2000.py
examples/case_studies/case_study_multi_asset.py
examples/case_studies/market_event_study_tsla_2024.py
examples/intermediate/03_trading_strategy_demo.py
examples/intermediate/04_multi_stock_comparative_study.py
examples/intermediate/05_advanced_analysis_showcase.py
examples/notebooks/01_Why_Log_Returns_Mathematical_Foundation.ipynb
examples/notebooks/02_HMM_Basics_Understanding_Regime_Detection.ipynb
examples/notebooks/03_Full_Pipeline_Advanced_Analysis.ipynb
examples/notebooks/04_Advanced_Trading_Applications.ipynb
examples/notebooks/05_multi_timeframe_regime_detection.ipynb
examples/notebooks/HMM101.ipynb
examples/notebooks/PipelineCheckout.ipynb
examples/output/reports/real_market_analysis_20251122_144904.md
examples/output/reports/regime_comparison_analysis_20251122_155043.md
examples/portfolios/all_weather_regime_portfolio.py
examples/portfolios/momentum_regime_rotation.py
examples/portfolios/quantconnect_simple_regime_following.py
examples/portfolios/volatility_targeting_regime.py
examples/quickstart/00_recommended_usage.py
examples/quickstart/01_real_market_analysis.py
examples/quickstart/02_regime_comparison_analysis.py
examples/quickstart/minimal_10_lines.py
examples/quickstart/test_deterioration_strategy.py
examples/quickstart/test_deterioration_walkforward.py
examples/quickstart/test_regime_following.py
examples/quickstart/validate_spy_regimes.py
examples/templates/case_study_template.py
hidden_regime/__init__.py
hidden_regime/_version.py
hidden_regime.egg-info/PKG-INFO
hidden_regime.egg-info/SOURCES.txt
hidden_regime.egg-info/dependency_links.txt
hidden_regime.egg-info/entry_points.txt
hidden_regime.egg-info/requires.txt
hidden_regime.egg-info/top_level.txt
hidden_regime/analysis/README.md
hidden_regime/analysis/__init__.py
hidden_regime/analysis/case_study.py
hidden_regime/analysis/indicator_comparison.py
hidden_regime/analysis/market_event_study.py
hidden_regime/analysis/performance.py
hidden_regime/analysis/regime_evolution.py
hidden_regime/analysis/regime_quality.py
hidden_regime/analysis/signal_attribution.py
hidden_regime/analysis/stability.py
hidden_regime/analysis/technical_indicators.py
hidden_regime/config/README.md
hidden_regime/config/__init__.py
hidden_regime/config/base.py
hidden_regime/config/case_study.py
hidden_regime/config/data.py
hidden_regime/config/interpreter.py
hidden_regime/config/model.py
hidden_regime/config/observation.py
hidden_regime/config/pipeline.py
hidden_regime/config/report.py
hidden_regime/config/signal_generation.py
hidden_regime/config/simulation.py
hidden_regime/data/README.md
hidden_regime/data/__init__.py
hidden_regime/data/collectors.py
hidden_regime/data/exporters.py
hidden_regime/data/financial.py
hidden_regime/data/session_pool.py
hidden_regime/factories/README.md
hidden_regime/factories/__init__.py
hidden_regime/factories/components.py
hidden_regime/factories/pipeline.py
hidden_regime/interpreter/README.md
hidden_regime/interpreter/__init__.py
hidden_regime/interpreter/base.py
hidden_regime/interpreter/financial.py
hidden_regime/interpreter/financial.py.backup
hidden_regime/interpreter/financial_old.py
hidden_regime/interpreter/regime_types.py
hidden_regime/models/README.md
hidden_regime/models/README.md.backup
hidden_regime/models/__init__.py
hidden_regime/models/algorithms.py
hidden_regime/models/hmm.py
hidden_regime/models/multitimeframe.py
hidden_regime/models/utils.py
hidden_regime/observations/README.md
hidden_regime/observations/__init__.py
hidden_regime/observations/base.py
hidden_regime/observations/financial.py
hidden_regime/pipeline/README.md
hidden_regime/pipeline/__init__.py
hidden_regime/pipeline/core.py
hidden_regime/pipeline/interfaces.py
hidden_regime/pipeline/schemas.py
hidden_regime/pipeline/temporal.py
hidden_regime/quantconnect/__init__.py
hidden_regime/quantconnect/algorithm.py
hidden_regime/quantconnect/alpha_model.py
hidden_regime/quantconnect/config.py
hidden_regime/quantconnect/data_adapter.py
hidden_regime/quantconnect/indicators.py
hidden_regime/quantconnect/optimized_algorithm.py
hidden_regime/quantconnect/signal_adapter.py
hidden_regime/quantconnect/universe_selection.py
hidden_regime/quantconnect/performance/__init__.py
hidden_regime/quantconnect/performance/batch_updates.py
hidden_regime/quantconnect/performance/caching.py
hidden_regime/quantconnect/performance/profiling.py
hidden_regime/reports/README.md
hidden_regime/reports/__init__.py
hidden_regime/reports/case_study.py
hidden_regime/reports/comprehensive.py
hidden_regime/reports/markdown.py
hidden_regime/signal_generation/README.md
hidden_regime/signal_generation/__init__.py
hidden_regime/signal_generation/base.py
hidden_regime/signal_generation/financial.py
hidden_regime/simulation/README.md
hidden_regime/simulation/__init__.py
hidden_regime/simulation/performance_analytics.py
hidden_regime/simulation/risk_management.py
hidden_regime/simulation/signal_generators.py
hidden_regime/simulation/simulation_orchestrator.py
hidden_regime/simulation/trading_engine.py
hidden_regime/utils/README.md
hidden_regime/utils/__init__.py
hidden_regime/utils/exceptions.py
hidden_regime/utils/formatting.py
hidden_regime/utils/regime_mapping.py
hidden_regime/utils/state_mapping.py
hidden_regime/utils/timeframe_resampling.py
hidden_regime/visualization/README.md
hidden_regime/visualization/__init__.py
hidden_regime/visualization/advanced_plots.py
hidden_regime/visualization/animations.py
hidden_regime/visualization/data_collection_plots.py
hidden_regime/visualization/indicators.py
hidden_regime/visualization/plotting.py
hidden_regime_mcp/__init__.py
hidden_regime_mcp/benchmark_cache.py
hidden_regime_mcp/cache.py
hidden_regime_mcp/errors.py
hidden_regime_mcp/prompts.py
hidden_regime_mcp/resources.py
hidden_regime_mcp/retry.py
hidden_regime_mcp/server.py
hidden_regime_mcp/tools.py
hidden_regime_mcp/verify_installation.py
output/notebooks/00_basic_regime_detection.ipynb
output/reports/user_experience_summary.md
quantconnect_templates/README.md
quantconnect_templates/TEMPLATES_GUIDE.md
quantconnect_templates/basic_regime_switching.py
quantconnect_templates/crisis_detection.py
quantconnect_templates/dynamic_position_sizing.py
quantconnect_templates/framework_example.py
quantconnect_templates/multi_asset_rotation.py
quantconnect_templates/optimized_multi_asset.py
quantconnect_templates/regime_deterioration_short.py
quantconnect_templates/sector_rotation.py
scripts/README.md
scripts/build_check.sh
scripts/build_docker.sh
scripts/ci_local.sh
scripts/lint.sh
scripts/quick_backtest.sh
scripts/setup_quantconnect.sh
scripts/test_coverage.sh
scripts/test_full.sh
scripts/test_unit.sh
tests/__init__.py
tests/conftest.py
tests/test_flexible_regime_classification.py
tests/test_improvements_validation.py
tests/test_new_architecture.py
tests/architecture/README.md
tests/architecture/__init__.py
tests/architecture/test_factory_pattern.py
tests/architecture/test_model_purity.py
tests/examples/test_quality_metrics_update.py
tests/fixtures/sample_data.py
tests/integration/__init__.py
tests/integration/test_component_pairs.py
tests/integration/test_config_validation.py
tests/integration/test_error_propagation.py
tests/integration/test_pipeline_e2e.py
tests/integration/test_temporal/__init__.py
tests/integration/test_temporal/test_lookahead_prevention.py
tests/integration/test_temporal/test_rolling_windows.py
tests/test_analysis/test_performance_working.py
tests/test_analysis/test_stability.py
tests/test_data/__init__.py
tests/test_data/conftest.py
tests/test_data/test_collectors.py
tests/test_data/test_datetime_index_consistency.py
tests/test_data/test_financial_working.py
tests/test_integration/test_factory_functions.py
tests/test_integration/test_performance.py
tests/test_integration/test_real_data.py
tests/test_mcp/__init__.py
tests/test_mcp/test_errors.py
tests/test_mcp/test_logging.py
tests/test_mcp/test_prompts.py
tests/test_mcp/test_resources.py
tests/test_mcp/test_resources_unit.py
tests/test_mcp/test_server.py
tests/test_mcp/test_tools.py
tests/test_mcp/test_tools_unit.py
tests/test_models/__init__.py
tests/test_models/conftest.py
tests/test_models/test_algorithms.py
tests/test_models/test_hmm_aspirational.py
tests/test_models/test_hmm_config.py
tests/test_models/test_hmm_custom_init.py
tests/test_models/test_hmm_scenarios.py
tests/test_models/test_hmm_updates.py
tests/test_models/test_hmm_working.py
tests/test_models/test_multitimeframe.py
tests/test_models/test_properties.py
tests/test_models/test_utils.py
tests/test_observations/test_base.py
tests/test_observations/test_observations_financial_working.py
tests/test_pipeline/test_core.py
tests/test_pipeline/test_interfaces.py
tests/test_pipeline/test_temporal.py
tests/test_quantconnect/__init__.py
tests/test_quantconnect/conftest.py
tests/test_quantconnect/test_data_adapter.py
tests/test_quantconnect/test_integration.py
tests/test_quantconnect/test_performance.py
tests/test_quantconnect/test_performance_regression.py
tests/test_quantconnect/test_signal_adapter.py
tests/test_quantconnect/test_stress.py
tests/test_reports/__init__.py
tests/test_reports/test_markdown_working.py
tests/test_reports/test_report_config_working.py
tests/unit/test_algorithms/__init__.py
tests/unit/test_algorithms/test_baum_welch.py
tests/unit/test_algorithms/test_forward_backward.py
tests/unit/test_algorithms/test_viterbi.py
tests/unit/test_analysis/test_analysis_modules.py
tests/unit/test_config/test_config_serialization.py
tests/unit/test_interpreter/__init__.py
tests/unit/test_interpreter/test_label_overrides.py
tests/unit/test_interpreter/test_multistate_regimes.py
tests/unit/test_interpreter/test_regime_boundaries.py
tests/unit/test_interpreter/test_regime_classification.py
tests/unit/test_interpreter/test_regime_persistence.py
tests/unit/test_models/test_hmm_advanced.py
tests/unit/test_signal_generation/test_signal_edge_cases.py
tests/unit/test_signals/__init__.py
tests/unit/test_signals/test_signal_generation.py
tests/unit/test_simulation/test_performance_analytics.py
tests/unit/test_simulation/test_risk_management.py
tests/unit/test_simulation/test_signal_generators.py
tests/unit/test_simulation/test_trading_engine.py
tests/unit/test_utils/test_exceptions.py
tests/unit/test_utils/test_formatting.py
tests/unit/test_utils/test_regime_mapping.py
tests/unit/test_utils/test_state_mapping.py
tests/unit/test_utils/test_timeframe_resampling.py
tests/unit/test_visualization/test_visualization_core.py