# This file was autogenerated by uv via the following command:
#    uv pip compile --all-extras pyproject.toml -o requirements-ubuntu-latest-3.14.txt
altair==6.0.0
    # via hdxms-datasets (pyproject.toml)
annotated-types==0.7.0
    # via pydantic
anyio==4.12.0
    # via
    #   httpx
    #   jupyter-server
    #   starlette
    #   watchfiles
argon2-cffi==25.1.0
    # via jupyter-server
argon2-cffi-bindings==25.1.0
    # via argon2-cffi
arrow==1.4.0
    # via isoduration
asttokens==3.0.1
    # via stack-data
async-lru==2.0.5
    # via jupyterlab
attrs==25.4.0
    # via
    #   jsonschema
    #   referencing
babel==2.17.0
    # via
    #   jupyterlab-server
    #   mkdocs-material
backrefs==6.1
    # via mkdocs-material
beautifulsoup4==4.14.3
    # via nbconvert
biopython==1.86
    # via hdxms-datasets (pyproject.toml)
black==25.12.0
    # via hdxms-datasets (pyproject.toml)
bleach==6.3.0
    # via nbconvert
cachetools==6.2.2
    # via solara-ui
certifi==2025.11.12
    # via
    #   httpcore
    #   httpx
    #   requests
cffi==2.0.0
    # via argon2-cffi-bindings
charset-normalizer==3.4.4
    # via requests
click==8.3.1
    # via
    #   black
    #   mkdocs
    #   rich-click
    #   solara-server
    #   typer
    #   uvicorn
cmap==0.6.2
    # via hdxms-datasets (pyproject.toml)
colorama==0.4.6
    # via
    #   griffe
    #   mkdocs-material
comm==0.2.3
    # via
    #   ipykernel
    #   ipywidgets
debugpy==1.8.17
    # via ipykernel
decorator==5.2.1
    # via ipython
defusedxml==0.7.1
    # via nbconvert
executing==2.2.1
    # via stack-data
fastjsonschema==2.21.2
    # via nbformat
filelock==3.20.0
    # via solara-server
fqdn==1.5.1
    # via jsonschema
ghp-import==2.1.0
    # via mkdocs
griffe==1.15.0
    # via mkdocstrings-python
h11==0.16.0
    # via
    #   httpcore
    #   uvicorn
httpcore==1.0.9
    # via httpx
httpx==0.28.1
    # via jupyterlab
humanize==4.14.0
    # via solara-ui
idna==3.11
    # via
    #   anyio
    #   httpx
    #   jsonschema
    #   requests
iniconfig==2.3.0
    # via pytest
ipykernel==6.31.0
    # via
    #   jupyter
    #   jupyter-console
    #   jupyterlab
    #   mkdocs-jupyter
    #   solara-server
ipython==9.8.0
    # via
    #   black
    #   ipykernel
    #   ipywidgets
    #   jupyter-console
ipython-pygments-lexers==1.1.1
    # via ipython
ipyvue==1.11.3
    # via
    #   ipyvuetify
    #   solara-ui
ipyvuetify==1.11.3
    # via solara-ui
ipywidgets==8.1.8
    # via
    #   ipyvue
    #   jupyter
    #   reacton
    #   solara-ui
isoduration==20.11.0
    # via jsonschema
jedi==0.19.2
    # via ipython
jinja2==3.1.6
    # via
    #   altair
    #   jupyter-server
    #   jupyterlab
    #   jupyterlab-server
    #   mkdocs
    #   mkdocs-material
    #   mkdocstrings
    #   nbconvert
    #   solara-server
json5==0.12.1
    # via jupyterlab-server
jsonpointer==3.0.0
    # via jsonschema
jsonschema==4.25.1
    # via
    #   altair
    #   jupyter-events
    #   jupyterlab-server
    #   nbformat
jsonschema-specifications==2025.9.1
    # via jsonschema
jupyter==1.1.1
    # via hdxms-datasets (pyproject.toml)
jupyter-client==8.6.3
    # via
    #   ipykernel
    #   jupyter-console
    #   jupyter-server
    #   nbclient
    #   solara-server
jupyter-console==6.6.3
    # via jupyter
jupyter-core==5.9.1
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-console
    #   jupyter-server
    #   jupyterlab
    #   nbclient
    #   nbconvert
    #   nbformat
jupyter-events==0.12.0
    # via jupyter-server
jupyter-lsp==2.3.0
    # via jupyterlab
jupyter-server==2.17.0
    # via
    #   jupyter-lsp
    #   jupyterlab
    #   jupyterlab-server
    #   notebook
    #   notebook-shim
jupyter-server-terminals==0.5.3
    # via jupyter-server
jupyterlab==4.5.0
    # via
    #   jupyter
    #   notebook
jupyterlab-pygments==0.3.0
    # via nbconvert
jupyterlab-server==2.28.0
    # via
    #   jupyterlab
    #   notebook
jupyterlab-widgets==3.0.16
    # via ipywidgets
jupytext==1.18.1
    # via mkdocs-jupyter
lark==1.3.1
    # via rfc3987-syntax
markdown==3.10
    # via
    #   mkdocs
    #   mkdocs-autorefs
    #   mkdocs-material
    #   mkdocstrings
    #   pymdown-extensions
    #   solara-ui
markdown-it-py==4.0.0
    # via
    #   jupytext
    #   mdit-py-plugins
    #   rich
markupsafe==3.0.3
    # via
    #   jinja2
    #   mkdocs
    #   mkdocs-autorefs
    #   mkdocstrings
    #   nbconvert
matplotlib-inline==0.2.1
    # via
    #   ipykernel
    #   ipython
mdit-py-plugins==0.5.0
    # via jupytext
mdurl==0.1.2
    # via markdown-it-py
mergedeep==1.3.4
    # via
    #   mkdocs
    #   mkdocs-get-deps
mistune==3.1.4
    # via nbconvert
mkdocs==1.6.1
    # via
    #   hdxms-datasets (pyproject.toml)
    #   mkdocs-autorefs
    #   mkdocs-gen-files
    #   mkdocs-jupyter
    #   mkdocs-literate-nav
    #   mkdocs-material
    #   mkdocstrings
mkdocs-autorefs==1.4.3
    # via
    #   mkdocstrings
    #   mkdocstrings-python
mkdocs-gen-files==0.6.0
    # via hdxms-datasets (pyproject.toml)
mkdocs-get-deps==0.2.0
    # via mkdocs
mkdocs-jupyter==0.25.1
    # via hdxms-datasets (pyproject.toml)
mkdocs-literate-nav==0.6.2
    # via hdxms-datasets (pyproject.toml)
mkdocs-material==9.7.0
    # via
    #   hdxms-datasets (pyproject.toml)
    #   mkdocs-jupyter
mkdocs-material-extensions==1.3.1
    # via mkdocs-material
mkdocstrings==1.0.0
    # via
    #   hdxms-datasets (pyproject.toml)
    #   mkdocstrings-python
mkdocstrings-python==2.0.1
    # via mkdocstrings
mypy-extensions==1.1.0
    # via black
narwhals==2.13.0
    # via
    #   hdxms-datasets (pyproject.toml)
    #   altair
nbclient==0.10.2
    # via nbconvert
nbconvert==7.16.6
    # via
    #   jupyter
    #   jupyter-server
    #   mkdocs-jupyter
nbformat==5.10.4
    # via
    #   jupyter-server
    #   jupytext
    #   nbclient
    #   nbconvert
    #   solara-server
nest-asyncio==1.6.0
    # via ipykernel
notebook==7.5.0
    # via jupyter
notebook-shim==0.2.4
    # via
    #   jupyterlab
    #   notebook
numpy==2.3.5
    # via
    #   hdxms-datasets (pyproject.toml)
    #   biopython
    #   cmap
    #   pandas
    #   patsy
    #   scipy
    #   solara-ui
    #   statsmodels
packaging==25.0
    # via
    #   altair
    #   black
    #   ipykernel
    #   jupyter-events
    #   jupyter-server
    #   jupyterlab
    #   jupyterlab-server
    #   jupytext
    #   mkdocs
    #   nbconvert
    #   pytest
    #   statsmodels
paginate==0.5.7
    # via mkdocs-material
pandas==2.3.3
    # via statsmodels
pandocfilters==1.5.1
    # via nbconvert
parso==0.8.5
    # via jedi
pathspec==0.12.1
    # via
    #   black
    #   mkdocs
patsy==1.0.2
    # via statsmodels
pexpect==4.9.0
    # via ipython
pillow==12.0.0
    # via solara-ui
platformdirs==4.5.1
    # via
    #   black
    #   jupyter-core
    #   mkdocs-get-deps
pluggy==1.6.0
    # via pytest
polars==1.36.0
    # via hdxms-datasets (pyproject.toml)
polars-runtime-32==1.36.0
    # via polars
prometheus-client==0.23.1
    # via jupyter-server
prompt-toolkit==3.0.52
    # via
    #   ipython
    #   jupyter-console
psutil==7.1.3
    # via ipykernel
ptyprocess==0.7.0
    # via
    #   pexpect
    #   terminado
pure-eval==0.2.3
    # via stack-data
pycparser==2.23
    # via cffi
pydantic==2.12.5
    # via hdxms-datasets (pyproject.toml)
pydantic-core==2.41.5
    # via pydantic
pygments==2.19.2
    # via
    #   hdxms-datasets (pyproject.toml)
    #   ipython
    #   ipython-pygments-lexers
    #   jupyter-console
    #   mkdocs-jupyter
    #   mkdocs-material
    #   nbconvert
    #   pytest
    #   rich
    #   solara-ui
pymdown-extensions==10.18
    # via
    #   mkdocs-material
    #   mkdocstrings
    #   solara-ui
pytest==9.0.2
    # via hdxms-datasets (pyproject.toml)
python-dateutil==2.9.0.post0
    # via
    #   arrow
    #   ghp-import
    #   jupyter-client
    #   pandas
python-json-logger==4.0.0
    # via jupyter-events
pytokens==0.3.0
    # via black
pytz==2025.2
    # via pandas
pyyaml==6.0.3
    # via
    #   hdxms-datasets (pyproject.toml)
    #   jupyter-events
    #   jupytext
    #   mkdocs
    #   mkdocs-get-deps
    #   pymdown-extensions
    #   pyyaml-env-tag
pyyaml-env-tag==1.1
    # via mkdocs
pyzmq==27.1.0
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-console
    #   jupyter-server
reacton==1.9.1
    # via solara-ui
referencing==0.37.0
    # via
    #   jsonschema
    #   jsonschema-specifications
    #   jupyter-events
requests==2.32.5
    # via
    #   hdxms-datasets (pyproject.toml)
    #   jupyterlab-server
    #   mkdocs-material
    #   solara-ui
rfc3339-validator==0.1.4
    # via
    #   jsonschema
    #   jupyter-events
rfc3986-validator==0.1.1
    # via
    #   jsonschema
    #   jupyter-events
rfc3987-syntax==1.1.0
    # via jsonschema
rich==14.2.0
    # via
    #   rich-click
    #   typer
rich-click==1.9.4
    # via solara-server
rpds-py==0.30.0
    # via
    #   jsonschema
    #   referencing
scipy==1.16.3
    # via statsmodels
send2trash==1.8.3
    # via jupyter-server
setuptools==80.9.0
    # via jupyterlab
shellingham==1.5.4
    # via typer
six==1.17.0
    # via
    #   python-dateutil
    #   rfc3339-validator
solara==1.55.1
    # via hdxms-datasets (pyproject.toml)
solara-server==1.55.1
    # via solara
solara-ui==1.55.1
    # via
    #   solara
    #   solara-server
soupsieve==2.8
    # via beautifulsoup4
stack-data==0.6.3
    # via ipython
starlette==0.50.0
    # via solara-server
statsmodels==0.14.6
    # via hdxms-datasets (pyproject.toml)
terminado==0.18.1
    # via
    #   jupyter-server
    #   jupyter-server-terminals
tinycss2==1.4.0
    # via bleach
tokenize-rt==6.2.0
    # via black
tornado==6.5.2
    # via
    #   ipykernel
    #   jupyter-client
    #   jupyter-server
    #   jupyterlab
    #   notebook
    #   terminado
traitlets==5.14.3
    # via
    #   ipykernel
    #   ipython
    #   ipywidgets
    #   jupyter-client
    #   jupyter-console
    #   jupyter-core
    #   jupyter-events
    #   jupyter-server
    #   jupyterlab
    #   matplotlib-inline
    #   nbclient
    #   nbconvert
    #   nbformat
typer==0.20.0
    # via hdxms-datasets (pyproject.toml)
typing-extensions==4.15.0
    # via
    #   altair
    #   anyio
    #   beautifulsoup4
    #   pydantic
    #   pydantic-core
    #   reacton
    #   referencing
    #   starlette
    #   typer
    #   typing-inspection
typing-inspection==0.4.2
    # via pydantic
tzdata==2025.2
    # via
    #   arrow
    #   pandas
uncertainties==3.2.3
    # via hdxms-datasets (pyproject.toml)
uri-template==1.3.0
    # via jsonschema
urllib3==2.6.1
    # via requests
uvicorn==0.38.0
    # via solara-server
watchdog==6.0.0
    # via
    #   mkdocs
    #   solara-server
watchfiles==1.1.1
    # via solara-server
wcwidth==0.2.14
    # via prompt-toolkit
webcolors==25.10.0
    # via jsonschema
webencodings==0.5.1
    # via
    #   bleach
    #   tinycss2
websocket-client==1.9.0
    # via jupyter-server
websockets==15.0.1
    # via solara-server
widgetsnbextension==4.0.15
    # via ipywidgets
