LICENSE
README.md
pyproject.toml
setup.py
src/HCDSIM.egg-info/PKG-INFO
src/HCDSIM.egg-info/SOURCES.txt
src/HCDSIM.egg-info/dependency_links.txt
src/HCDSIM.egg-info/entry_points.txt
src/HCDSIM.egg-info/requires.txt
src/HCDSIM.egg-info/top_level.txt
src/hcdsim/__init__.py
src/hcdsim/chisel_utils.py
src/hcdsim/generate_barcode_bam.py
src/hcdsim/main.py
src/hcdsim/random_tree.py
src/hcdsim/utils.py
src/hcdsim/version.py
src/hcdsim/bench/__init__.py
src/hcdsim/bench/cnclass.py
src/hcdsim/bench/cndetect.py
src/hcdsim/bench/hcCNchange.py
src/hcdsim/bench/hcPhasing.py
src/hcdsim/bench/hccnchange.py
src/hcdsim/bench/hccnstable.py
src/hcdsim/bench/hconsetacc.py
src/hcdsim/bench/hconsetcn.py
src/hcdsim/bench/mirrorsubclone.py
src/hcdsim/bench/subdetect.py
src/hcdsim/bin/__init__.py
src/hcdsim/bin/hcdbench_main.py
src/hcdsim/bin/hcdsim_main.py