#!/usr/bin/env python
"""
# Author: Yuyao Liu
# File Name: __init__.py
# Description:
"""

__author__ = "Yuyao Liu"
__email__ = "yliuow@connect.ust.hk"

from .model import Harmonics_Model
from .hypo_test import ct_enrichment_test, cci_enrichment_test, nnc_enrichment_test, cal_nnc_mtx, nnc_between_groups_test
from .utils import Delaunay_adjacency_mtx, knn_adjacency_matrix, joint_adjacency_matrix, radius_adjacency_matrix, \
    index2onehot, label2onehot, label2onehot_anndata, calculate_distribution, update_microenvironment, \
    pca, measure_distribution_gap, cell2cellniche, cell2cellniche_cond, ctr_cond_merge, refine_dist, \
    stability_score, asw_score, fast_asw_score, js_asw_score, fast_js_asw_score, variance_ratio_score, fast_variance_ratio_score, \
    dist_aware_silhouette_score, dist_aware_variance_ratio_score, minjsd_bootstrap_basic, minjsd_bootstrap_cond