.gitignore
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.pre-commit-config.yaml
LICENSE
README.md
openapitools.json
pyproject.toml
uv.lock
.github/workflows/on_push_main.yml
.github/workflows/python.yml
.idea/.gitignore
.idea/haplohub-python.iml
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bin/extract.sh
bin/generate.sh
docs/AccessionApi.md
docs/AccessionSchema.md
docs/AlgorithmApi.md
docs/AlgorithmId.md
docs/AlgorithmResultApi.md
docs/AlgorithmResultId.md
docs/AlgorithmResultSchema.md
docs/AlgorithmResultStatus.md
docs/AlgorithmSchema.md
docs/AlgorithmVersionApi.md
docs/AlgorithmVersionId.md
docs/AlgorithmVersionId1.md
docs/AlgorithmVersionSchema.md
docs/ApiKeyApi.md
docs/ApiKeySchema.md
docs/AuthSchema.md
docs/BiomarkerApi.md
docs/BiomarkerResultApi.md
docs/BiomarkerResultSchema.md
docs/CohortApi.md
docs/CohortDetailSchema.md
docs/CohortId.md
docs/CohortId1.md
docs/CohortSchema.md
docs/CreateAlgorithmResultRequest.md
docs/CreateAlgorithmResultResponse.md
docs/CreateApiKeySchema.md
docs/CreateCohortRequest.md
docs/CreateCohortResponse.md
docs/CreateEnvironmentRequest.md
docs/CreateEnvironmentResponse.md
docs/CreateMemberRequest.md
docs/CreateModelRequest.md
docs/CreateModelResponse.md
docs/CreateReportRequest.md
docs/CreateReportResponse.md
docs/CreateReportTemplateRequest.md
docs/CreateReportTemplateResponse.md
docs/CreateSampleRequest.md
docs/CreateUploadRequestRequest.md
docs/CreateUploadRequestResponse.md
docs/DefaultApi.md
docs/DetailWorkflowRunSchema.md
docs/DirSchema.md
docs/DownloadLinkSchema.md
docs/EnvironmentApi.md
docs/EnvironmentId.md
docs/EnvironmentSchema.md
docs/EnvironmentsApi.md
docs/ErrorResponse.md
docs/ErrorSchema.md
docs/FileApi.md
docs/FileDirSchema.md
docs/FileId.md
docs/FileId1.md
docs/FileInfo.md
docs/FileSchema.md
docs/FinishUploadingRequest.md
docs/GenericResponse.md
docs/GetAlgorithmResponse.md
docs/GetAlgorithmResultResponse.md
docs/GetAlgorithmVersionResponse.md
docs/GetCohortResponse.md
docs/GetHgvsResponse.md
docs/GetMemberPgsScoreResponse.md
docs/GetPredictionResponse.md
docs/GetPredictionResultsResponse.md
docs/GetReportResponse.md
docs/GetReportTemplateResponse.md
docs/GetTraitCategoryResponse.md
docs/GetTraitResponse.md
docs/GetVariantRequest.md
docs/HgvsDosageSchema.md
docs/HgvsSchema.md
docs/Id.md
docs/InfinityPaginatedResponseLogSchema.md
docs/ListAlgorithmVersionsResponse.md
docs/ListAlgorithmsResponse.md
docs/ListFilesFilter.md
docs/ListFilesRequest.md
docs/ListMemberPgsScoresResponse.md
docs/ListModelsRequest.md
docs/ListTraitCategoriesResponse.md
docs/ListTraitsResponse.md
docs/LogApi.md
docs/LogSchema.md
docs/LookupHgvsRequest.md
docs/MLModelSchema.md
docs/MemberApi.md
docs/MemberId.md
docs/MemberId1.md
docs/MemberId2.md
docs/MemberPGSScoreApi.md
docs/MemberPgsScoreSchema.md
docs/MemberReportApi.md
docs/MemberSchema.md
docs/MetadataApi.md
docs/ModelApi.md
docs/ModelId.md
docs/MostSimilarPopulation.md
docs/OrderSchema.md
docs/PaginatedResponseAccessionSchema.md
docs/PaginatedResponseAlgorithmResultSchema.md
docs/PaginatedResponseAlgorithmSchema.md
docs/PaginatedResponseAlgorithmVersionSchema.md
docs/PaginatedResponseApiKeySchema.md
docs/PaginatedResponseCohortSchema.md
docs/PaginatedResponseEnvironmentSchema.md
docs/PaginatedResponseFileSchema.md
docs/PaginatedResponseMLModelSchema.md
docs/PaginatedResponseMemberSchema.md
docs/PaginatedResponsePredictionSchema.md
docs/PaginatedResponseReportSchema2.md
docs/PaginatedResponseReportTemplateListSchema.md
docs/PaginatedResponseReportTemplateSchema.md
docs/PaginatedResponseSampleFileSchema.md
docs/PaginatedResponseSampleSchema.md
docs/PaginatedResponseScoreSchema.md
docs/PaginatedResponseWorkflowRunSchema.md
docs/PredictionApi.md
docs/PredictionResultsSchema.md
docs/PredictionSchema.md
docs/PredictionStatus.md
docs/PushCredentials.md
docs/PushModelRequest.md
docs/ReportApi.md
docs/ReportSchema2.md
docs/ReportTemplateApi.md
docs/ReportTemplateId.md
docs/ReportTemplateId1.md
docs/ReportTemplateListSchema.md
docs/ReportTemplateSchema.md
docs/ReportType.md
docs/RequestSchema.md
docs/Response.md
docs/ResponseSchema.md
docs/ResponseStatus.md
docs/ResultId.md
docs/ResultListResponseBiomarkerResultSchema.md
docs/ResultListResponseHgvsSchema.md
docs/ResultListResponseVariantSchema.md
docs/ResultResponse.md
docs/ResultResponseAlgorithmResultSchema.md
docs/ResultResponseAlgorithmSchema.md
docs/ResultResponseAlgorithmVersionSchema.md
docs/ResultResponseApiKeySchema.md
docs/ResultResponseDetailWorkflowRunSchema.md
docs/ResultResponseDirSchema.md
docs/ResultResponseDownloadLinkSchema.md
docs/ResultResponseFileDirSchema.md
docs/ResultResponseFileSchema.md
docs/ResultResponseMemberSchema.md
docs/ResultResponsePushCredentials.md
docs/ResultResponseSampleFileSchema.md
docs/ResultResponseSampleSchema.md
docs/ResultResponseScoreSchema.md
docs/ResultResponseUploadRequestResponse.md
docs/ResultSchema.md
docs/RunPredictionRequest.md
docs/RunPredictionResponse.md
docs/SampleApi.md
docs/SampleFileApi.md
docs/SampleFileSchema.md
docs/SampleId.md
docs/SampleId1.md
docs/SampleId2.md
docs/SampleSchema.md
docs/ScoreId.md
docs/ScoreSchema.md
docs/SuccessResponse.md
docs/SwitchEnvironmentResponse.md
docs/TenantSchema.md
docs/TraitApi.md
docs/TraitCategoryApi.md
docs/TraitCategorySchema.md
docs/TraitSchema.md
docs/UpdateCohortRequest.md
docs/UpdateCohortResponse.md
docs/UpdateMemberRequest.md
docs/UpdateReportRequest.md
docs/UpdateReportResponse.md
docs/UpdateReportTemplateRequest.md
docs/UpdateReportTemplateResponse.md
docs/UpdateSampleRequest.md
docs/UploadApi.md
docs/UploadLink.md
docs/UploadLinkSchema.md
docs/UploadRequestResponse.md
docs/UploadRequstSchema.md
docs/UploadType.md
docs/UserSchema.md
docs/VariantApi.md
docs/VariantRange.md
docs/VariantSchema.md
docs/WorkflowApi.md
docs/WorkflowHistorySchema.md
docs/WorkflowRunSchema.md
haplohub/__init__.py
haplohub/_version.py
haplohub/api_client.py
haplohub/api_response.py
haplohub/configuration.py
haplohub/exceptions.py
haplohub/py.typed
haplohub/rest.py
haplohub.egg-info/PKG-INFO
haplohub.egg-info/SOURCES.txt
haplohub.egg-info/dependency_links.txt
haplohub.egg-info/requires.txt
haplohub.egg-info/top_level.txt
haplohub/api/__init__.py
haplohub/api/accession_api.py
haplohub/api/algorithm_api.py
haplohub/api/algorithm_result_api.py
haplohub/api/algorithm_version_api.py
haplohub/api/api_key_api.py
haplohub/api/biomarker_api.py
haplohub/api/biomarker_result_api.py
haplohub/api/cohort_api.py
haplohub/api/default_api.py
haplohub/api/environment_api.py
haplohub/api/environments_api.py
haplohub/api/file_api.py
haplohub/api/log_api.py
haplohub/api/member_api.py
haplohub/api/member_pgs_score_api.py
haplohub/api/member_report_api.py
haplohub/api/metadata_api.py
haplohub/api/model_api.py
haplohub/api/prediction_api.py
haplohub/api/report_api.py
haplohub/api/report_template_api.py
haplohub/api/sample_api.py
haplohub/api/sample_file_api.py
haplohub/api/trait_api.py
haplohub/api/trait_category_api.py
haplohub/api/upload_api.py
haplohub/api/variant_api.py
haplohub/api/workflow_api.py
haplohub/models/__init__.py
haplohub/models/accession_schema.py
haplohub/models/algorithm_id.py
haplohub/models/algorithm_result_id.py
haplohub/models/algorithm_result_schema.py
haplohub/models/algorithm_result_status.py
haplohub/models/algorithm_schema.py
haplohub/models/algorithm_version_id.py
haplohub/models/algorithm_version_id1.py
haplohub/models/algorithm_version_schema.py
haplohub/models/api_key_schema.py
haplohub/models/auth_schema.py
haplohub/models/biomarker_result_schema.py
haplohub/models/cohort_detail_schema.py
haplohub/models/cohort_id.py
haplohub/models/cohort_id1.py
haplohub/models/cohort_schema.py
haplohub/models/create_algorithm_result_request.py
haplohub/models/create_algorithm_result_response.py
haplohub/models/create_api_key_schema.py
haplohub/models/create_cohort_request.py
haplohub/models/create_cohort_response.py
haplohub/models/create_environment_request.py
haplohub/models/create_environment_response.py
haplohub/models/create_member_request.py
haplohub/models/create_model_request.py
haplohub/models/create_model_response.py
haplohub/models/create_report_request.py
haplohub/models/create_report_response.py
haplohub/models/create_report_template_request.py
haplohub/models/create_report_template_response.py
haplohub/models/create_sample_request.py
haplohub/models/create_upload_request_request.py
haplohub/models/create_upload_request_response.py
haplohub/models/detail_workflow_run_schema.py
haplohub/models/dir_schema.py
haplohub/models/download_link_schema.py
haplohub/models/environment_id.py
haplohub/models/environment_schema.py
haplohub/models/error_response.py
haplohub/models/error_schema.py
haplohub/models/file_dir_schema.py
haplohub/models/file_id.py
haplohub/models/file_id1.py
haplohub/models/file_info.py
haplohub/models/file_schema.py
haplohub/models/finish_uploading_request.py
haplohub/models/generic_response.py
haplohub/models/get_algorithm_response.py
haplohub/models/get_algorithm_result_response.py
haplohub/models/get_algorithm_version_response.py
haplohub/models/get_cohort_response.py
haplohub/models/get_hgvs_response.py
haplohub/models/get_member_pgs_score_response.py
haplohub/models/get_prediction_response.py
haplohub/models/get_prediction_results_response.py
haplohub/models/get_report_response.py
haplohub/models/get_report_template_response.py
haplohub/models/get_trait_category_response.py
haplohub/models/get_trait_response.py
haplohub/models/get_variant_request.py
haplohub/models/hgvs_dosage_schema.py
haplohub/models/hgvs_schema.py
haplohub/models/id.py
haplohub/models/infinity_paginated_response_log_schema.py
haplohub/models/list_algorithm_versions_response.py
haplohub/models/list_algorithms_response.py
haplohub/models/list_files_filter.py
haplohub/models/list_files_request.py
haplohub/models/list_member_pgs_scores_response.py
haplohub/models/list_models_request.py
haplohub/models/list_trait_categories_response.py
haplohub/models/list_traits_response.py
haplohub/models/log_schema.py
haplohub/models/lookup_hgvs_request.py
haplohub/models/member_id.py
haplohub/models/member_id1.py
haplohub/models/member_id2.py
haplohub/models/member_pgs_score_schema.py
haplohub/models/member_schema.py
haplohub/models/ml_model_schema.py
haplohub/models/model_id.py
haplohub/models/most_similar_population.py
haplohub/models/order_schema.py
haplohub/models/paginated_response_accession_schema.py
haplohub/models/paginated_response_algorithm_result_schema.py
haplohub/models/paginated_response_algorithm_schema.py
haplohub/models/paginated_response_algorithm_version_schema.py
haplohub/models/paginated_response_api_key_schema.py
haplohub/models/paginated_response_cohort_schema.py
haplohub/models/paginated_response_environment_schema.py
haplohub/models/paginated_response_file_schema.py
haplohub/models/paginated_response_member_schema.py
haplohub/models/paginated_response_ml_model_schema.py
haplohub/models/paginated_response_prediction_schema.py
haplohub/models/paginated_response_report_schema2.py
haplohub/models/paginated_response_report_template_list_schema.py
haplohub/models/paginated_response_report_template_schema.py
haplohub/models/paginated_response_sample_file_schema.py
haplohub/models/paginated_response_sample_schema.py
haplohub/models/paginated_response_score_schema.py
haplohub/models/paginated_response_workflow_run_schema.py
haplohub/models/prediction_results_schema.py
haplohub/models/prediction_schema.py
haplohub/models/prediction_status.py
haplohub/models/push_credentials.py
haplohub/models/push_model_request.py
haplohub/models/report_schema2.py
haplohub/models/report_template_id.py
haplohub/models/report_template_id1.py
haplohub/models/report_template_list_schema.py
haplohub/models/report_template_schema.py
haplohub/models/report_type.py
haplohub/models/request_schema.py
haplohub/models/response.py
haplohub/models/response_schema.py
haplohub/models/response_status.py
haplohub/models/result_id.py
haplohub/models/result_list_response_biomarker_result_schema.py
haplohub/models/result_list_response_hgvs_schema.py
haplohub/models/result_list_response_variant_schema.py
haplohub/models/result_response.py
haplohub/models/result_response_algorithm_result_schema.py
haplohub/models/result_response_algorithm_schema.py
haplohub/models/result_response_algorithm_version_schema.py
haplohub/models/result_response_api_key_schema.py
haplohub/models/result_response_detail_workflow_run_schema.py
haplohub/models/result_response_dir_schema.py
haplohub/models/result_response_download_link_schema.py
haplohub/models/result_response_file_dir_schema.py
haplohub/models/result_response_file_schema.py
haplohub/models/result_response_member_schema.py
haplohub/models/result_response_push_credentials.py
haplohub/models/result_response_sample_file_schema.py
haplohub/models/result_response_sample_schema.py
haplohub/models/result_response_score_schema.py
haplohub/models/result_response_upload_request_response.py
haplohub/models/result_schema.py
haplohub/models/run_prediction_request.py
haplohub/models/run_prediction_response.py
haplohub/models/sample_file_schema.py
haplohub/models/sample_id.py
haplohub/models/sample_id1.py
haplohub/models/sample_id2.py
haplohub/models/sample_schema.py
haplohub/models/score_id.py
haplohub/models/score_schema.py
haplohub/models/success_response.py
haplohub/models/switch_environment_response.py
haplohub/models/tenant_schema.py
haplohub/models/trait_category_schema.py
haplohub/models/trait_schema.py
haplohub/models/update_cohort_request.py
haplohub/models/update_cohort_response.py
haplohub/models/update_member_request.py
haplohub/models/update_report_request.py
haplohub/models/update_report_response.py
haplohub/models/update_report_template_request.py
haplohub/models/update_report_template_response.py
haplohub/models/update_sample_request.py
haplohub/models/upload_link.py
haplohub/models/upload_link_schema.py
haplohub/models/upload_request_response.py
haplohub/models/upload_requst_schema.py
haplohub/models/upload_type.py
haplohub/models/user_schema.py
haplohub/models/variant_range.py
haplohub/models/variant_schema.py
haplohub/models/workflow_history_schema.py
haplohub/models/workflow_run_schema.py
template/README.mustache
template/README_onlypackage.mustache
template/__init__.mustache
template/__init__api.mustache
template/__init__model.mustache
template/__init__package.mustache
template/api.mustache
template/api_client.mustache
template/api_doc.mustache
template/api_doc_example.mustache
template/api_response.mustache
template/api_test.mustache
template/common_README.mustache
template/configuration.mustache
template/exceptions.mustache
template/git_push.sh.mustache
template/github-workflow.mustache
template/gitignore.mustache
template/gitlab-ci.mustache
template/model.mustache
template/model_anyof.mustache
template/model_doc.mustache
template/model_enum.mustache
template/model_generic.mustache
template/model_oneof.mustache
template/model_test.mustache
template/partial_header.mustache
template/py.typed.mustache
template/pyproject.mustache
template/python_doc_auth_partial.mustache
template/requirements.mustache
template/rest.mustache
template/setup.mustache
template/setup_cfg.mustache
template/signing.mustache
template/test-requirements.mustache
template/tox.mustache
template/travis.mustache
template/asyncio/rest.mustache
template/tornado/rest.mustache
test/__init__.py
test/test_accession_api.py
test/test_accession_schema.py
test/test_algorithm_api.py
test/test_algorithm_id.py
test/test_algorithm_result_api.py
test/test_algorithm_result_id.py
test/test_algorithm_result_schema.py
test/test_algorithm_result_status.py
test/test_algorithm_schema.py
test/test_algorithm_version_api.py
test/test_algorithm_version_id.py
test/test_algorithm_version_id1.py
test/test_algorithm_version_schema.py
test/test_api_key_api.py
test/test_api_key_schema.py
test/test_auth_schema.py
test/test_biomarker_api.py
test/test_biomarker_result_api.py
test/test_biomarker_result_schema.py
test/test_cohort_api.py
test/test_cohort_detail_schema.py
test/test_cohort_id.py
test/test_cohort_id1.py
test/test_cohort_schema.py
test/test_create_algorithm_result_request.py
test/test_create_algorithm_result_response.py
test/test_create_api_key_schema.py
test/test_create_cohort_request.py
test/test_create_cohort_response.py
test/test_create_environment_request.py
test/test_create_environment_response.py
test/test_create_member_request.py
test/test_create_model_request.py
test/test_create_model_response.py
test/test_create_report_request.py
test/test_create_report_response.py
test/test_create_report_template_request.py
test/test_create_report_template_response.py
test/test_create_sample_request.py
test/test_create_upload_request_request.py
test/test_create_upload_request_response.py
test/test_default_api.py
test/test_detail_workflow_run_schema.py
test/test_dir_schema.py
test/test_download_link_schema.py
test/test_environment_api.py
test/test_environment_id.py
test/test_environment_schema.py
test/test_environments_api.py
test/test_error_response.py
test/test_error_schema.py
test/test_file_api.py
test/test_file_dir_schema.py
test/test_file_id.py
test/test_file_id1.py
test/test_file_info.py
test/test_file_schema.py
test/test_finish_uploading_request.py
test/test_generic_response.py
test/test_get_algorithm_response.py
test/test_get_algorithm_result_response.py
test/test_get_algorithm_version_response.py
test/test_get_cohort_response.py
test/test_get_hgvs_response.py
test/test_get_member_pgs_score_response.py
test/test_get_prediction_response.py
test/test_get_prediction_results_response.py
test/test_get_report_response.py
test/test_get_report_template_response.py
test/test_get_trait_category_response.py
test/test_get_trait_response.py
test/test_get_variant_request.py
test/test_hgvs_dosage_schema.py
test/test_hgvs_schema.py
test/test_id.py
test/test_infinity_paginated_response_log_schema.py
test/test_list_algorithm_versions_response.py
test/test_list_algorithms_response.py
test/test_list_files_filter.py
test/test_list_files_request.py
test/test_list_member_pgs_scores_response.py
test/test_list_models_request.py
test/test_list_trait_categories_response.py
test/test_list_traits_response.py
test/test_log_api.py
test/test_log_schema.py
test/test_lookup_hgvs_request.py
test/test_member_api.py
test/test_member_id.py
test/test_member_id1.py
test/test_member_id2.py
test/test_member_pgs_score_api.py
test/test_member_pgs_score_schema.py
test/test_member_report_api.py
test/test_member_schema.py
test/test_metadata_api.py
test/test_ml_model_schema.py
test/test_model_api.py
test/test_model_id.py
test/test_most_similar_population.py
test/test_order_schema.py
test/test_paginated_response_accession_schema.py
test/test_paginated_response_algorithm_result_schema.py
test/test_paginated_response_algorithm_schema.py
test/test_paginated_response_algorithm_version_schema.py
test/test_paginated_response_api_key_schema.py
test/test_paginated_response_cohort_schema.py
test/test_paginated_response_environment_schema.py
test/test_paginated_response_file_schema.py
test/test_paginated_response_member_schema.py
test/test_paginated_response_ml_model_schema.py
test/test_paginated_response_prediction_schema.py
test/test_paginated_response_report_schema2.py
test/test_paginated_response_report_template_list_schema.py
test/test_paginated_response_report_template_schema.py
test/test_paginated_response_sample_file_schema.py
test/test_paginated_response_sample_schema.py
test/test_paginated_response_score_schema.py
test/test_paginated_response_workflow_run_schema.py
test/test_prediction_api.py
test/test_prediction_results_schema.py
test/test_prediction_schema.py
test/test_prediction_status.py
test/test_push_credentials.py
test/test_push_model_request.py
test/test_report_api.py
test/test_report_schema2.py
test/test_report_template_api.py
test/test_report_template_id.py
test/test_report_template_id1.py
test/test_report_template_list_schema.py
test/test_report_template_schema.py
test/test_report_type.py
test/test_request_schema.py
test/test_response.py
test/test_response_schema.py
test/test_response_status.py
test/test_result_id.py
test/test_result_list_response_biomarker_result_schema.py
test/test_result_list_response_hgvs_schema.py
test/test_result_list_response_variant_schema.py
test/test_result_response.py
test/test_result_response_algorithm_result_schema.py
test/test_result_response_algorithm_schema.py
test/test_result_response_algorithm_version_schema.py
test/test_result_response_api_key_schema.py
test/test_result_response_detail_workflow_run_schema.py
test/test_result_response_dir_schema.py
test/test_result_response_download_link_schema.py
test/test_result_response_file_dir_schema.py
test/test_result_response_file_schema.py
test/test_result_response_member_schema.py
test/test_result_response_push_credentials.py
test/test_result_response_sample_file_schema.py
test/test_result_response_sample_schema.py
test/test_result_response_score_schema.py
test/test_result_response_upload_request_response.py
test/test_result_schema.py
test/test_run_prediction_request.py
test/test_run_prediction_response.py
test/test_sample_api.py
test/test_sample_file_api.py
test/test_sample_file_schema.py
test/test_sample_id.py
test/test_sample_id1.py
test/test_sample_id2.py
test/test_sample_schema.py
test/test_score_id.py
test/test_score_schema.py
test/test_success_response.py
test/test_switch_environment_response.py
test/test_tenant_schema.py
test/test_trait_api.py
test/test_trait_category_api.py
test/test_trait_category_schema.py
test/test_trait_schema.py
test/test_update_cohort_request.py
test/test_update_cohort_response.py
test/test_update_member_request.py
test/test_update_report_request.py
test/test_update_report_response.py
test/test_update_report_template_request.py
test/test_update_report_template_response.py
test/test_update_sample_request.py
test/test_upload_api.py
test/test_upload_link.py
test/test_upload_link_schema.py
test/test_upload_request_response.py
test/test_upload_requst_schema.py
test/test_upload_type.py
test/test_user_schema.py
test/test_variant_api.py
test/test_variant_range.py
test/test_variant_schema.py
test/test_workflow_api.py
test/test_workflow_history_schema.py
test/test_workflow_run_schema.py