LICENSE
README.md
setup.py
gwaspy/__init__.py
gwaspy.egg-info/PKG-INFO
gwaspy.egg-info/SOURCES.txt
gwaspy.egg-info/dependency_links.txt
gwaspy.egg-info/entry_points.txt
gwaspy.egg-info/not-zip-safe
gwaspy.egg-info/requires.txt
gwaspy.egg-info/top_level.txt
gwaspy/imputation/__init__.py
gwaspy/imputation/concat_vcfs.py
gwaspy/imputation/imputation.py
gwaspy/imputation/impute_vcf.py
gwaspy/imputation/sex_aut_imp.py
gwaspy/pca/__init__.py
gwaspy/pca/assign_pop_labels.py
gwaspy/pca/filter_ref_data.py
gwaspy/pca/pca.py
gwaspy/pca/pca_filter_snps.py
gwaspy/pca/pca_joint.py
gwaspy/pca/pca_normal.py
gwaspy/pca/pca_project.py
gwaspy/phasing/__init__.py
gwaspy/phasing/concat_vcfs.py
gwaspy/phasing/get_filebase.py
gwaspy/phasing/phase_vcf.py
gwaspy/phasing/phasing.py
gwaspy/phasing/scatter_vcf.py
gwaspy/preimp_qc/__init__.py
gwaspy/preimp_qc/aggregators.py
gwaspy/preimp_qc/annotations.py
gwaspy/preimp_qc/plots.py
gwaspy/preimp_qc/preimp_qc.py
gwaspy/preimp_qc/report.py
gwaspy/utils/__init__.py
gwaspy/utils/export_file.py
gwaspy/utils/get_file_size.py
gwaspy/utils/natural_sort.py
gwaspy/utils/read_file.py
gwaspy/utils/reference_liftover.py
gwaspy/utils/sample_annotations.py