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Interactive 3D view of spatial data with -log10(p) values and annotations side by side.

-log10(p) -

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Annotation -

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Spatial distribution of -log10(p) values and annotations side by side.

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Annotation -

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Gene expression and GSS distribution for selected sample.

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Gene Diagnostic Table

Gene PCC Annotation Median GSS
Showing of genes

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Spatial distribution of annotations across samples.

Select an annotation category to view the plot.

UMAP visualization of cell and niche embeddings with -log10(p) and annotations.

spots

Cell Embedding

-log10(p) -

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Niche Embedding

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GWAS results. Red = top PCC genes. Green diamond = selected gene.

Statistical significance of annotations.

Trait Annotation Sample -log10P (Cauchy) -log10P (Median) 95% Quantile (-log10P) Total Spots

Configuration and summary statistics.

Traits

Samples

Annotation Categories

Configuration