pandas
biopandas>=0.5.1
biopython
bioservices>=1.10.0
cpdb-protein==0.2.0
cython
deepdiff
loguru
looseversion
matplotlib>=3.4.3
multipledispatch
networkx
numpy<2
pandas
plotly
pydantic
rich
rich-click
seaborn
pyyaml!=5.4.0,!=5.4.1,!=6.0.0
scikit-learn
scipy>=1.8
tqdm
wget
xarray
jaxtyping

[all]
isort
pytest-cov
pydocstyle
hypothesis
pytest-xdist
nbval
propy3
pyaaisc
biovec
pycodestyle
nest_asyncio
pandoc
interrogate
black
pre-commit
einops
pytest
foldcomp
selfies
flake8
smilite
rdkit
mpl_chord_diagram==0.3.2
nbstripout

[dev]
black
flake8
hypothesis
interrogate
isort
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist

[extras]
biovec
propy3
pyaaisc
mpl_chord_diagram==0.3.2
rdkit
selfies
smilite
einops
foldcomp
nest_asyncio
