.gitignore
LICENSE
README.md
noxfile.py
pyproject.toml
uv.lock
.github/workflows/ci.yaml
.github/workflows/publish.yaml
grapevne/__init__.py
grapevne/grapevne.py
grapevne/version.py
grapevne.egg-info/PKG-INFO
grapevne.egg-info/SOURCES.txt
grapevne.egg-info/dependency_links.txt
grapevne.egg-info/requires.txt
grapevne.egg-info/top_level.txt
grapevne/helpers/__init__.py
grapevne/helpers/helpers.py
tests/Dockerfile_Snakemake7
tests/Dockerfile_Snakemake8
tests/docker_test_snakemake7.sh
tests/docker_test_snakemake8.sh
tests/grapevne_helper.py
tests/run_tests.sh
tests/test_grapevne.py
tests/test_helpers.py
tests/test-repo/test_snakemake.sh
tests/test-repo/touch-copy/.test.sh
tests/test-repo/touch-copy/config/config.yaml
tests/test-repo/touch-copy/results/copy/touch
tests/test-repo/touch-copy/results/touch/touch
tests/test-repo/touch-copy/workflow/Snakefile
tests/test-repo/workflows/testing/modules/concat/.test.sh
tests/test-repo/workflows/testing/modules/concat/config/.test.yaml
tests/test-repo/workflows/testing/modules/concat/config/config.yaml
tests/test-repo/workflows/testing/modules/concat/results/out/data.csv
tests/test-repo/workflows/testing/modules/concat/results/port1/data.csv
tests/test-repo/workflows/testing/modules/concat/results/port2/data.csv
tests/test-repo/workflows/testing/modules/concat/workflow/Snakefile
tests/test-repo/workflows/testing/modules/concat/workflow/grapevne_helper.py
tests/test-repo/workflows/testing/modules/concat/workflow/resources/dummy.txt
tests/test-repo/workflows/testing/modules/concat/workflow/scripts/dummy.sh
tests/test-repo/workflows/testing/modules/copy/.test.sh
tests/test-repo/workflows/testing/modules/copy/config/.test.yaml
tests/test-repo/workflows/testing/modules/copy/config/config.yaml
tests/test-repo/workflows/testing/modules/copy/resources/dummy.txt
tests/test-repo/workflows/testing/modules/copy/results/in/data.csv
tests/test-repo/workflows/testing/modules/copy/results/out/data.csv
tests/test-repo/workflows/testing/modules/copy/workflow/Snakefile
tests/test-repo/workflows/testing/modules/copy/workflow/grapevne_helper.py
tests/test-repo/workflows/testing/modules/copy/workflow/scripts/dummy.sh
tests/test-repo/workflows/testing/modules/copy_gv_context/.test.sh
tests/test-repo/workflows/testing/modules/copy_gv_context/config/.test.yaml
tests/test-repo/workflows/testing/modules/copy_gv_context/config/config.yaml
tests/test-repo/workflows/testing/modules/copy_gv_context/resources/dummy.txt
tests/test-repo/workflows/testing/modules/copy_gv_context/results/in/data.csv
tests/test-repo/workflows/testing/modules/copy_gv_context/workflow/Snakefile
tests/test-repo/workflows/testing/modules/copy_gv_context/workflow/grapevne_helper.py
tests/test-repo/workflows/testing/modules/copy_gv_context/workflow/scripts/dummy.sh
tests/test-repo/workflows/testing/modules/copy_gv_namespace/.test.sh
tests/test-repo/workflows/testing/modules/copy_gv_namespace/config/.test.yaml
tests/test-repo/workflows/testing/modules/copy_gv_namespace/config/config.yaml
tests/test-repo/workflows/testing/modules/copy_gv_namespace/resources/dummy.txt
tests/test-repo/workflows/testing/modules/copy_gv_namespace/results/in/data.csv
tests/test-repo/workflows/testing/modules/copy_gv_namespace/workflow/Snakefile
tests/test-repo/workflows/testing/modules/copy_gv_namespace/workflow/grapevne_helper.py
tests/test-repo/workflows/testing/modules/copy_gv_namespace/workflow/scripts/dummy.sh
tests/test-repo/workflows/testing/modules/copy_gv_object/.test.sh
tests/test-repo/workflows/testing/modules/copy_gv_object/config/.test.yaml
tests/test-repo/workflows/testing/modules/copy_gv_object/config/config.yaml
tests/test-repo/workflows/testing/modules/copy_gv_object/resources/dummy.txt
tests/test-repo/workflows/testing/modules/copy_gv_object/results/in/data.csv
tests/test-repo/workflows/testing/modules/copy_gv_object/workflow/Snakefile
tests/test-repo/workflows/testing/modules/copy_gv_object/workflow/grapevne_helper.py
tests/test-repo/workflows/testing/modules/copy_gv_object/workflow/scripts/dummy.sh
tests/test-repo/workflows/testing/sources/touch/.test.sh
tests/test-repo/workflows/testing/sources/touch/config/.test.yaml
tests/test-repo/workflows/testing/sources/touch/config/config.yaml
tests/test-repo/workflows/testing/sources/touch/results/out/touch
tests/test-repo/workflows/testing/sources/touch/workflow/Snakefile
tests/test-repo/workflows/testing/sources/touch/workflow/grapevne_helper.py