LICENSE
MANIFEST.in
README.md
pyproject.toml
GQC/AssemblyFunctions.R
GQC/AssemblyMultiplot.R
GQC/AssemblySummaryPlots.R
GQC/BenchCoveragePlot.R
GQC/DiscrepancyCountPlot.R
GQC/IndelLengthPlot.R
GQC/MononucAccuracy.R
GQC/NGAxPlot.R
GQC/PlotAssemblyContigAligns.R
GQC/PlotAssemblyQualValueAccuracy.R
GQC/PlotChromAligns.R
GQC/ReadMononucAccuracy.R
GQC/TestCoveragePlot.R
GQC/__init__.py
GQC/__main__.py
GQC/align.py
GQC/alignparse.py
GQC/assemblygraph.py
GQC/bamdiscrepancies.py
GQC/bedtoolslib.py
GQC/bench.py
GQC/compare.py
GQC/constructgenome.py
GQC/coverage.py
GQC/errors.py
GQC/examinesynteny.py
GQC/getextremekmers.py
GQC/gethets.py
GQC/heatmap.py
GQC/kmers.py
GQC/mononucs.py
GQC/multiplot.py
GQC/mummermethods.py
GQC/output.py
GQC/phasing.py
GQC/plots.py
GQC/readbench.py
GQC/seqparse.py
GQC/stats.py
GQC/structvar.py
GQC/variants.py
GQC.egg-info/PKG-INFO
GQC.egg-info/SOURCES.txt
GQC.egg-info/dependency_links.txt
GQC.egg-info/entry_points.txt
GQC.egg-info/requires.txt
GQC.egg-info/top_level.txt
docs/conf.py
tests/__init__.py
tests/test_calls.py