\select@language {english}
\contentsline {chapter}{\numberline {1}Command line Tool}{3}{chapter.1}
\contentsline {section}{\numberline {1.1}Installing the package}{3}{section.1.1}
\contentsline {section}{\numberline {1.2}Example usage}{3}{section.1.2}
\contentsline {section}{\numberline {1.3}Further Details}{4}{section.1.3}
\contentsline {subsection}{\numberline {1.3.1}Parameter options}{4}{subsection.1.3.1}
\contentsline {subsection}{\numberline {1.3.2}Data format}{4}{subsection.1.3.2}
\contentsline {subsection}{\numberline {1.3.3}Accounting for confounding factors}{4}{subsection.1.3.3}
\contentsline {subsection}{\numberline {1.3.4}Timeshift detection between replicates}{5}{subsection.1.3.4}
\contentsline {subsection}{\numberline {1.3.5}Result structure}{5}{subsection.1.3.5}
\contentsline {subsection}{\numberline {1.3.6}Step by step tutorial \& examples}{5}{subsection.1.3.6}
\contentsline {chapter}{\numberline {2}Developer}{9}{chapter.2}
\contentsline {section}{\numberline {2.1}Package for using GPTwoSample}{9}{section.2.1}
\contentsline {section}{\numberline {2.2}GPTwoSample plot}{14}{section.2.2}
\contentsline {subsection}{\numberline {2.2.1}Plot GPTwoSample predictions}{14}{subsection.2.2.1}
\contentsline {section}{\numberline {2.3}Package for data handling}{15}{section.2.3}
\contentsline {subsection}{\numberline {2.3.1}Data Structure Module}{15}{subsection.2.3.1}
\contentsline {subsection}{\numberline {2.3.2}Data IO tool}{16}{subsection.2.3.2}
\contentsline {chapter}{Bibliography}{19}{chapter*.38}
\contentsline {chapter}{Python Module Index}{21}{section*.41}
