README.md
pyproject.toml
setup.py
./gpathex/__init__.py
./gpathex/cli.py
./gpathex/common.py
./gpathex/config.py
./gpathex/commands/__init__.py
./gpathex/commands/download_ko.py
./gpathex/commands/download_org.py
./gpathex/commands/download_proteins.py
./gpathex/commands/get_ranks.py
./gpathex/commands/make_keg.py
./gpathex/commands/makedb.py
./gpathex/commands/plot_keg.py
./gpathex/commands/process_proteins.py
./gpathex/tests/__init__.py
./gpathex/tests/conftest.py
./gpathex/tests/test_cli.py
./gpathex/tests/test_commands_download.py
./gpathex/tests/test_integration.py
./gpathex/tests/test_utils_fasta.py
./gpathex/tests/test_utils_kegg.py
./gpathex/tests/test_utils_parsers.py
./gpathex/tests/test_data/__init__.py
./gpathex/utils/__init__.py
./gpathex/utils/downloader.py
./gpathex/utils/fasta.py
./gpathex/utils/kegg.py
./gpathex/utils/parsers.py
./gpathex/utils/polars_utils.py
./gpathex/utils/taxonomy.py
gpathex/__init__.py
gpathex/cli.py
gpathex/common.py
gpathex/config.py
gpathex.egg-info/PKG-INFO
gpathex.egg-info/SOURCES.txt
gpathex.egg-info/dependency_links.txt
gpathex.egg-info/entry_points.txt
gpathex.egg-info/not-zip-safe
gpathex.egg-info/requires.txt
gpathex.egg-info/top_level.txt
gpathex/commands/__init__.py
gpathex/commands/download_ko.py
gpathex/commands/download_org.py
gpathex/commands/download_proteins.py
gpathex/commands/get_ranks.py
gpathex/commands/make_keg.py
gpathex/commands/makedb.py
gpathex/commands/plot_keg.py
gpathex/commands/process_proteins.py
gpathex/tests/__init__.py
gpathex/tests/conftest.py
gpathex/tests/test_cli.py
gpathex/tests/test_commands_download.py
gpathex/tests/test_integration.py
gpathex/tests/test_utils_fasta.py
gpathex/tests/test_utils_kegg.py
gpathex/tests/test_utils_parsers.py
gpathex/tests/test_data/__init__.py
gpathex/utils/__init__.py
gpathex/utils/downloader.py
gpathex/utils/fasta.py
gpathex/utils/kegg.py
gpathex/utils/parsers.py
gpathex/utils/polars_utils.py
gpathex/utils/taxonomy.py