dill>=0.3.5.1
six
sqlalchemy<1.4.0
scipy
matplotlib>=3.4.3
scikit-learn
pyteomics
lxml
click
jinja2>=2.11.1
rdflib
requests
SPARQLWrapper
ms_deisotope>=0.0.55
glypy>=1.0.6
glycopeptidepy>=0.0.28
brain-isotopic-distribution>=1.5.8
ms_peak_picker>=0.1.46
python-idzip>=0.3.2
pyzstd

[:python_version < "3.9"]
numpy

[:python_version >= "3.9"]
numpy>=2.0.0

[fragmentation-modeling]
glycopeptide-feature-learning
