from .descriptors import (ModificationCategory, SequenceLocation)
from .utils import (ModificationIndex, ModificationNameResolutionError, ModificationStringParseError)

from .target import (
    ModificationTarget, get_position_modifier_rules_dict,
    extract_targets_from_string, extract_targets_from_rule_string,
    title_cleaner, is_mass_delta)

from .rule import (ModificationRule, AnonymousModificationRule, AminoAcidSubstitution)
from .glycosylation import (
    Glycosylation, CoreGlycosylation, NGlycanCoreGlycosylation,
    MucinOGlycanCoreGlycosylation, OGlycanCoreGlycosylation, GlycosaminoglycanLinkerGlycosylation,
    OGlcNAcylation, GlycanFragment, hexnac_modification, xylose_modification,
    parse_glycan, glycan_resolvers, glycoct, iupac, linear_code, wurcs)

from .source import (
    ModificationSource, ModificationTable, RestrictedModificationTable, rule_string_to_specialized_rule)

from .modification import Modification


__all__ = [
    "ModificationCategory", "SequenceLocation",
    "ModificationIndex", "ModificationNameResolutionError", "ModificationStringParseError",

    "ModificationTarget", "get_position_modifier_rules_dict",
    "extract_targets_from_string", "extract_targets_from_rule_string",
    "title_cleaner", "is_mass_delta",

    "ModificationRule", "AnonymousModificationRule", "AminoAcidSubstitution",

    "Glycosylation", "CoreGlycosylation", "NGlycanCoreGlycosylation",
    "MucinOGlycanCoreGlycosylation", "OGlycanCoreGlycosylation", "GlycosaminoglycanLinkerGlycosylation",
    "OGlcNAcylation", "GlycanFragment", "hexnac_modification", "xylose_modification",
    "parse_glycan", "glycan_resolvers", "glycoct", "iupac", "linear_code", "wurcs",

    "ModificationSource", "ModificationTable", "RestrictedModificationTable",
    "rule_string_to_specialized_rule",

    "Modification",
]
