MANIFEST.in
README.md
pyproject.toml
requirements.txt
setup.py
glycopeptidepy/__init__.py
glycopeptidepy/algorithm.py
glycopeptidepy/enzyme.py
glycopeptidepy/version.py
glycopeptidepy.egg-info/PKG-INFO
glycopeptidepy.egg-info/SOURCES.txt
glycopeptidepy.egg-info/dependency_links.txt
glycopeptidepy.egg-info/not-zip-safe
glycopeptidepy.egg-info/requires.txt
glycopeptidepy.egg-info/top_level.txt
glycopeptidepy/_c/__init__.py
glycopeptidepy/_c/algorithm.c
glycopeptidepy/_c/algorithm.pyx
glycopeptidepy/_c/collectiontools.c
glycopeptidepy/_c/collectiontools.pxd
glycopeptidepy/_c/collectiontools.pyx
glycopeptidepy/_c/compat.h
glycopeptidepy/_c/compat.pxd
glycopeptidepy/_c/count_table.c
glycopeptidepy/_c/count_table.pxd
glycopeptidepy/_c/count_table.pyx
glycopeptidepy/_c/cythonize.py
glycopeptidepy/_c/parser.c
glycopeptidepy/_c/parser.pxd
glycopeptidepy/_c/parser.pyx
glycopeptidepy/_c/structure/__init__.py
glycopeptidepy/_c/structure/base.c
glycopeptidepy/_c/structure/base.pxd
glycopeptidepy/_c/structure/base.pyx
glycopeptidepy/_c/structure/constants.c
glycopeptidepy/_c/structure/constants.pxd
glycopeptidepy/_c/structure/constants.pyx
glycopeptidepy/_c/structure/fragment.c
glycopeptidepy/_c/structure/fragment.pxd
glycopeptidepy/_c/structure/fragment.pyx
glycopeptidepy/_c/structure/glycan.c
glycopeptidepy/_c/structure/glycan.pxd
glycopeptidepy/_c/structure/glycan.pyx
glycopeptidepy/_c/structure/sequence_methods.c
glycopeptidepy/_c/structure/sequence_methods.pxd
glycopeptidepy/_c/structure/sequence_methods.pyx
glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py
glycopeptidepy/_c/structure/fragmentation_strategy/base.c
glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd
glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx
glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c
glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd
glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx
glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c
glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd
glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx
glycopeptidepy/_c/structure/modification/__init__.py
glycopeptidepy/_c/structure/modification/modification.c
glycopeptidepy/_c/structure/modification/modification.pxd
glycopeptidepy/_c/structure/modification/modification.pyx
glycopeptidepy/_c/structure/modification/rule.c
glycopeptidepy/_c/structure/modification/rule.pxd
glycopeptidepy/_c/structure/modification/rule.pyx
glycopeptidepy/_c/structure/modification/source.c
glycopeptidepy/_c/structure/modification/source.pxd
glycopeptidepy/_c/structure/modification/source.pyx
glycopeptidepy/_c/structure/modification/target.pyx
glycopeptidepy/io/__init__.py
glycopeptidepy/io/annotation.py
glycopeptidepy/io/fasta.py
glycopeptidepy/io/nextprot.py
glycopeptidepy/io/uniprot.py
glycopeptidepy/io/utils.py
glycopeptidepy/io/cv/__init__.py
glycopeptidepy/io/cv/peff.py
glycopeptidepy/io/cv/term.py
glycopeptidepy/io/cv/uniprot_ptm.py
glycopeptidepy/structure/__init__.py
glycopeptidepy/structure/base.py
glycopeptidepy/structure/composition.py
glycopeptidepy/structure/constants.py
glycopeptidepy/structure/fragment.py
glycopeptidepy/structure/glycan.py
glycopeptidepy/structure/parser.py
glycopeptidepy/structure/residue.py
glycopeptidepy/structure/sequence_composition.py
glycopeptidepy/structure/terminal_group.py
glycopeptidepy/structure/fragmentation_strategy/__init__.py
glycopeptidepy/structure/fragmentation_strategy/base.py
glycopeptidepy/structure/fragmentation_strategy/glycan.py
glycopeptidepy/structure/fragmentation_strategy/peptide.py
glycopeptidepy/structure/modification/__init__.py
glycopeptidepy/structure/modification/descriptors.py
glycopeptidepy/structure/modification/glycosylation.py
glycopeptidepy/structure/modification/modification.py
glycopeptidepy/structure/modification/rule.py
glycopeptidepy/structure/modification/source.py
glycopeptidepy/structure/modification/target.py
glycopeptidepy/structure/modification/utils.py
glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv
glycopeptidepy/structure/modification/data/__init__.py
glycopeptidepy/structure/modification/data/patch_unimod.py
glycopeptidepy/structure/modification/data/unimod.json
glycopeptidepy/structure/modification/data/unimod.py
glycopeptidepy/structure/sequence/__init__.py
glycopeptidepy/structure/sequence/base.py
glycopeptidepy/structure/sequence/glycosylated_sequence.py
glycopeptidepy/structure/sequence/implementation.py
glycopeptidepy/structure/sequence/mutable_sequence.py
glycopeptidepy/test/__init__.py
glycopeptidepy/test/common.py
glycopeptidepy/test/test_algorithms.py
glycopeptidepy/test/test_enzyme.py
glycopeptidepy/test/test_fasta.py
glycopeptidepy/test/test_fragment.py
glycopeptidepy/test/test_fragmentation_strategy.py
glycopeptidepy/test/test_intervals.py
glycopeptidepy/test/test_modification.py
glycopeptidepy/test/test_residue.py
glycopeptidepy/test/test_sequence.py
glycopeptidepy/test/test_sequence_composition.py
glycopeptidepy/test/test_uniprot.py
glycopeptidepy/test/test_utils.py
glycopeptidepy/utils/__init__.py
glycopeptidepy/utils/collectiontools.py
glycopeptidepy/utils/intervals.py
glycopeptidepy/utils/iterators.py
glycopeptidepy/utils/memoize.py
glycopeptidepy/utils/sequence_tree.py