LICENSE.md
MANIFEST.in
README.md
pyproject.toml
setup.cfg
geodock/GeoDockRunner.py
geodock/__init__.py
geodock.egg-info/PKG-INFO
geodock.egg-info/SOURCES.txt
geodock.egg-info/dependency_links.txt
geodock.egg-info/requires.txt
geodock.egg-info/top_level.txt
geodock/datasets/RepD2_dataset.py
geodock/datasets/__init__.py
geodock/datasets/bound_dataset.py
geodock/datasets/gen_dataset.py
geodock/datasets/geodock_datamodule.py
geodock/datasets/geodock_dataset.py
geodock/datasets/unbound_dataset.py
geodock/model/GeoDock.py
geodock/model/__init__.py
geodock/model/interface.py
geodock/model/modules/__init__.py
geodock/model/modules/graph_module.py
geodock/model/modules/iterative_transformer.py
geodock/model/modules/structure_module.py
geodock/refine/__init__.py
geodock/refine/openmm_ref.py
geodock/refine/pyrosetta_ref.py
geodock/trainer/__init__.py
geodock/trainer/run.py
geodock/trainer/train.py
geodock/trainer/utils.py
geodock/utils/__init__.py
geodock/utils/coords6d.py
geodock/utils/docking.py
geodock/utils/embed.py
geodock/utils/loss.py
geodock/utils/metrics.py
geodock/utils/pdb.py
geodock/utils/transforms.py