Metadata-Version: 2.0
Name: genotype-network
Version: 0.1.4
Summary: A package for constructing and analyzing protein genotype                  networks in Python.
Home-page: https://github.com/ericmjl/genotype-network
Author: Eric J. Ma
Author-email: ericmajinglong@gmail.com
License: MIT
Keywords: proteins,networks,bioinformatics
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.2
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Requires-Dist: networkx
Requires-Dist: python-Levenshtein
Requires-Dist: biopython

# genotype-network

Genotype Networks were defined in a paper by Wagner (2014)[http://rspb.royalsocietypublishing.org/content/281/1786/20132763]. A protein genotype network is defined as such: a graph, in which nodes are unique protein sequences, and edges connect nodes that differ by a single amino acid substitution, insertion or deletion.

This Python package is written to provide Pythonistas a way to construct and analyze protein genotype networks. Everything here is currently experimental, we would welcome pull requests and suggestions on how to make it more useful!

# Contributor List

- @Chevelant (Kyle Yuan, MIT)

