.coveragerc
.gitignore
.pre-commit-config.yaml
.readthedocs.yml
AUTHORS.md
CHANGELOG.md
CONTRIBUTING.md
LICENSE.txt
README.md
pyproject.toml
setup.cfg
setup.py
tox.ini
.github/workflows/pypi-publish.yml
.github/workflows/pypi-test.yml
docs/Makefile
docs/authors.md
docs/changelog.md
docs/conf.py
docs/contributing.md
docs/index.md
docs/license.md
docs/readme.md
docs/requirements.txt
docs/tutorial.md
docs/_static/.gitignore
src/GenomicRanges.egg-info/PKG-INFO
src/GenomicRanges.egg-info/SOURCES.txt
src/GenomicRanges.egg-info/dependency_links.txt
src/GenomicRanges.egg-info/not-zip-safe
src/GenomicRanges.egg-info/requires.txt
src/GenomicRanges.egg-info/top_level.txt
src/genomicranges/GenomicRanges.py
src/genomicranges/GenomicRangesList.py
src/genomicranges/SeqInfo.py
src/genomicranges/__init__.py
src/genomicranges/utils.py
src/genomicranges/io/__init__.py
src/genomicranges/io/gtf.py
src/genomicranges/io/ucsc.py
tests/conftest.py
tests/test_SeqInfo.py
tests/test_gr_binnedAvg.py
tests/test_gr_comparisons.py
tests/test_gr_init_seqnames.py
tests/test_gr_initialize.py
tests/test_gr_initialize_pandas.py
tests/test_gr_initialize_polars.py
tests/test_gr_inter_range_methods.py
tests/test_gr_methods_basic.py
tests/test_gr_methods_coverage.py
tests/test_gr_methods_flank.py
tests/test_gr_methods_other.py
tests/test_gr_methods_resize.py
tests/test_gr_methods_search.py
tests/test_gr_misc.py
tests/test_gr_overlaps.py
tests/test_gr_seqInfo_trim.py
tests/test_gr_set_ops.py
tests/test_gr_subtract.py
tests/test_gr_tiling.py
tests/test_gr_to_grl.py
tests/test_grl_initialize.py
tests/test_grl_methods.py
tests/test_ucsc.py